Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP46P62068 RNU6-80P-201ENST00000384195 107 ntBASIC5.12□□□□□ -1.59
USP46P62068 U3.30-201ENST00000391308 210 ntBASIC5.12□□□□□ -1.59
USP46P62068 RPS26P42-201ENST00000413485 326 ntBASIC5.12□□□□□ -1.59
USP46P62068 AC104333.2-201ENST00000422630 192 ntBASIC5.12□□□□□ -1.59
USP46P62068 AC019205.3-201ENST00000424573 156 ntBASIC5.12□□□□□ -1.59
USP46P62068 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC5.12□□□□□ -1.59
USP46P62068 HMGB1P37-201ENST00000439613 609 ntBASIC5.12□□□□□ -1.59
USP46P62068 RPL39P29-201ENST00000447779 157 ntBASIC5.12□□□□□ -1.59
USP46P62068 TPT1P12-201ENST00000448968 492 ntBASIC5.12□□□□□ -1.59
USP46P62068 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.12□□□□□ -1.59
USP46P62068 RN7SKP164-201ENST00000516138 266 ntBASIC5.12□□□□□ -1.59
USP46P62068 Y_RNA.686-201ENST00000516548 134 ntBASIC5.12□□□□□ -1.59
USP46P62068 AP002001.1-203ENST00000534002 267 ntBASIC5.12□□□□□ -1.59
USP46P62068 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.12□□□□□ -1.59
USP46P62068 DNAJC19P2-201ENST00000593340 302 ntBASIC5.12□□□□□ -1.59
USP46P62068 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.12□□□□□ -1.59
USP46P62068 BX005214.3-202ENST00000619809 325 ntBASIC5.12□□□□□ -1.59
USP46P62068 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.12□□□□□ -1.59
USP46P62068 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.12□□□□□ -1.59
USP46P62068 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP46P62068 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
USP46P62068 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
USP46P62068 U3.15-201ENST00000365398 212 ntBASIC5.11□□□□□ -1.59
USP46P62068 MIR539-201ENST00000365690 78 ntBASIC5.11□□□□□ -1.59
USP46P62068 RNU6-578P-201ENST00000390980 103 ntBASIC5.11□□□□□ -1.59
USP46P62068 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
USP46P62068 AL590139.1-201ENST00000416267 400 ntBASIC5.11□□□□□ -1.59
USP46P62068 RPL21P66-201ENST00000426566 466 ntBASIC5.11□□□□□ -1.59
USP46P62068 HMGB3P8-201ENST00000449709 577 ntBASIC5.11□□□□□ -1.59
USP46P62068 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.11□□□□□ -1.59
USP46P62068 AC021269.2-201ENST00000532318 330 ntBASIC5.11□□□□□ -1.59
USP46P62068 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.11□□□□□ -1.59
USP46P62068 MIR4330-201ENST00000579077 105 ntBASIC5.11□□□□□ -1.59
USP46P62068 AC008873.1-201ENST00000625051 138 ntBASIC5.11□□□□□ -1.59
USP46P62068 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.11□□□□□ -1.59
USP46P62068 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
USP46P62068 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.11□□□□□ -1.59
USP46P62068 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.1□□□□□ -1.59
USP46P62068 OR51H2P-202ENST00000641424 3046 ntBASIC5.1□□□□□ -1.59
USP46P62068 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
USP46P62068 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 RNU2-52P-201ENST00000410680 190 ntBASIC5.1□□□□□ -1.59
USP46P62068 AL160275.2-201ENST00000412010 394 ntBASIC5.1□□□□□ -1.59
USP46P62068 AC096649.2-201ENST00000416186 393 ntBASIC5.1□□□□□ -1.59
USP46P62068 AL645608.4-201ENST00000423619 154 ntBASIC5.1□□□□□ -1.59
USP46P62068 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.1□□□□□ -1.59
USP46P62068 AL356535.1-201ENST00000440335 398 ntBASIC5.1□□□□□ -1.59
USP46P62068 AC074290.1-201ENST00000448883 135 ntBASIC5.1□□□□□ -1.59
USP46P62068 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
USP46P62068 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
USP46P62068 RNU6-581P-201ENST00000516214 105 ntBASIC5.1□□□□□ -1.59
USP46P62068 RNU6-107P-201ENST00000516643 102 ntBASIC5.1□□□□□ -1.59
USP46P62068 SNORA31.16-201ENST00000516773 139 ntBASIC5.1□□□□□ -1.59
USP46P62068 IPO5P1-202ENST00000600039 287 ntBASIC5.1□□□□□ -1.59
USP46P62068 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.1□□□□□ -1.59
USP46P62068 CR381572.2-201ENST00000624852 397 ntBASIC5.1□□□□□ -1.59
USP46P62068 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
USP46P62068 NEAT1-202ENST00000501122 22743 ntBASIC5.09□□□□□ -1.59
USP46P62068 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP46P62068 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP46P62068 LINC01355-201ENST00000566551 5444 ntBASIC5.09□□□□□ -1.59
USP46P62068 RNU6-899P-201ENST00000363947 107 ntBASIC5.09□□□□□ -1.59
USP46P62068 RNA5SP505-201ENST00000364748 108 ntBASIC5.09□□□□□ -1.59
USP46P62068 Y_RNA.293-201ENST00000364908 93 ntBASIC5.09□□□□□ -1.59
USP46P62068 BX510359.2-201ENST00000417920 305 ntBASIC5.09□□□□□ -1.59
USP46P62068 RPL36AP10-201ENST00000421785 322 ntBASIC5.09□□□□□ -1.59
USP46P62068 AC011753.3-201ENST00000443436 406 ntBASIC5.09□□□□□ -1.59
USP46P62068 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC5.09□□□□□ -1.59
USP46P62068 AC073264.2-201ENST00000448886 166 ntBASIC5.09□□□□□ -1.59
USP46P62068 RPL30P5-201ENST00000494923 336 ntBASIC5.09□□□□□ -1.59
USP46P62068 RNA5SP360-201ENST00000516555 118 ntBASIC5.09□□□□□ -1.59
USP46P62068 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC5.09□□□□□ -1.59
USP46P62068 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.09□□□□□ -1.59
USP46P62068 AC022726.1-201ENST00000587475 207 ntBASIC5.09□□□□□ -1.59
USP46P62068 AL451007.1-201ENST00000595491 289 ntBASIC5.09□□□□□ -1.59
USP46P62068 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC5.09□□□□□ -1.59
USP46P62068 FAM27B-201ENST00000610601 213 ntBASIC5.09□□□□□ -1.59
USP46P62068 MIR6780A-201ENST00000615089 68 ntBASIC5.09□□□□□ -1.59
USP46P62068 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
USP46P62068 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP46P62068 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP46P62068 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
USP46P62068 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
USP46P62068 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
USP46P62068 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
USP46P62068 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.08□□□□□ -1.6
USP46P62068 AL133383.2-201ENST00000622958 2336 ntBASIC5.08□□□□□ -1.6
USP46P62068 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.08□□□□□ -1.6
USP46P62068 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
USP46P62068 AC126755.2-208ENST00000327792 462 ntBASIC5.08□□□□□ -1.6
USP46P62068 AC138969.1-213ENST00000331436 462 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms