Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RPL21P47-201ENST00000483696 477 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AC108729.1-201ENST00000487812 947 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.6□□□□□ -2.31
CCL3L1P16619 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC0.6□□□□□ -2.31
CCL3L1P16619 RNVU1-2-201ENST00000516326 135 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 RNU6-586P-201ENST00000517265 104 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC019176.1-201ENST00000518519 225 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC0.6□□□□□ -2.31
CCL3L1P16619 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AP000763.2-201ENST00000540641 163 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.6□□□□□ -2.31
CCL3L1P16619 MRPS36P5-201ENST00000551909 298 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC012414.2-201ENST00000559474 187 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AC233266.2-201ENST00000567067 528 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AC012414.6-201ENST00000568241 401 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 MTATP6P3-201ENST00000581686 676 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AL355802.4-201ENST00000607635 548 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 AL078604.3-201ENST00000615580 211 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.6□□□□□ -2.31
CCL3L1P16619 AP003485.1-201ENST00000625093 753 ntBASIC0.6□□□□□ -2.31
CCL3L1P16619 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CCL3L1P16619 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCL3L1P16619 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.6□□□□□ -2.31
CCL3L1P16619 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
CCL3L1P16619 Y_RNA.238-201ENST00000364441 102 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 RNU6-1187P-201ENST00000364771 110 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
CCL3L1P16619 RNU6-637P-201ENST00000384050 107 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 BTF3L4P3-201ENST00000418879 476 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 NCOR1P3-201ENST00000420479 303 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 HGF-207ENST00000453018 721 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 AC013267.1-201ENST00000458227 267 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AP001025.1-201ENST00000486139 332 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AC117454.1-201ENST00000491120 168 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 AC010460.2-201ENST00000509054 677 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 RNA5SP384-201ENST00000516615 116 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 SNORA31.17-201ENST00000516953 127 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 RNA5SP404-201ENST00000517118 132 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC0.59□□□□□ -2.31
CCL3L1P16619 RAB11AP2-201ENST00000545905 639 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.59□□□□□ -2.31
CCL3L1P16619 AL731537.2-201ENST00000561565 951 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 CLIC4P2-201ENST00000601934 717 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 RMST_10.1-201ENST00000616309 154 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 AC006213.5-201ENST00000619673 288 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
CCL3L1P16619 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CCL3L1P16619 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
CCL3L1P16619 MIR302D-201ENST00000362275 68 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 SNORD1A-201ENST00000364968 72 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 SNORD51.1-201ENST00000365405 77 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 RNU6-26P-201ENST00000383985 107 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
CCL3L1P16619 AL133475.1-201ENST00000404414 305 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC0.58□□□□□ -2.32
CCL3L1P16619 USP9YP26-201ENST00000421008 661 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 CST2P1-201ENST00000425770 87 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 USP9YP18-201ENST00000425912 695 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 USP9YP17-201ENST00000444617 696 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.58□□□□□ -2.32
CCL3L1P16619 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.58□□□□□ -2.32
CCL3L1P16619 MTND2P6-201ENST00000455337 1030 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC026410.2-201ENST00000460281 156 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 RPL39P28-201ENST00000465655 155 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC010409.1-201ENST00000487382 476 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC109927.2-201ENST00000506416 303 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC008628.1-201ENST00000508663 265 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 FABP5P5-201ENST00000515537 406 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 LINC00557-201ENST00000563184 1279 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 AC090615.1-201ENST00000577519 154 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 NIFKP6-201ENST00000598115 845 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 RPL30P11-203ENST00000598995 310 ntBASIC0.58□□□□□ -2.32
CCL3L1P16619 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.58□□□□□ -2.32
CCL3L1P16619 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.58□□□□□ -2.32
CCL3L1P16619 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.58□□□□□ -2.32
CCL3L1P16619 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCL3L1P16619 AC027514.1-201ENST00000588561 1603 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CCL3L1P16619 RNU6-492P-201ENST00000363035 104 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 Y_RNA.226-201ENST00000364337 114 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 RNU6-17P-201ENST00000384245 107 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 RNU6-18P-201ENST00000384527 107 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
CCL3L1P16619 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
CCL3L1P16619 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.57□□□□□ -2.32
CCL3L1P16619 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms