Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC022655.2-201ENST00000577280 318 ntBASIC4.47□□□□□ -1.69
SOX1O00570 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX1O00570 MIR6715A-201ENST00000615929 79 ntBASIC4.47□□□□□ -1.69
SOX1O00570 AC131238.1-201ENST00000617135 328 ntBASIC4.47□□□□□ -1.69
SOX1O00570 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX1O00570 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
SOX1O00570 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX1O00570 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
SOX1O00570 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SOX1O00570 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 RNU6-301P-201ENST00000384277 107 ntBASIC4.46□□□□□ -1.7
SOX1O00570 RNU6-102P-201ENST00000384485 104 ntBASIC4.46□□□□□ -1.7
SOX1O00570 SNORA53-201ENST00000391141 249 ntBASIC4.46□□□□□ -1.7
SOX1O00570 HSPE1P12-201ENST00000412576 301 ntBASIC4.46□□□□□ -1.7
SOX1O00570 COX6CP10-201ENST00000416832 224 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC007919.1-201ENST00000429380 217 ntBASIC4.46□□□□□ -1.7
SOX1O00570 Z82188.1-201ENST00000436709 154 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC016700.2-201ENST00000446011 156 ntBASIC4.46□□□□□ -1.7
SOX1O00570 RPL23AP81-201ENST00000455252 467 ntBASIC4.46□□□□□ -1.7
SOX1O00570 snoU109.2-201ENST00000459316 135 ntBASIC4.46□□□□□ -1.7
SOX1O00570 Y_RNA.683-201ENST00000516508 93 ntBASIC4.46□□□□□ -1.7
SOX1O00570 RN7SKP272-201ENST00000516988 232 ntBASIC4.46□□□□□ -1.7
SOX1O00570 RNA5SP291-201ENST00000517222 105 ntBASIC4.46□□□□□ -1.7
SOX1O00570 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.46□□□□□ -1.7
SOX1O00570 RPL23AP53-201ENST00000521854 457 ntBASIC4.46□□□□□ -1.7
SOX1O00570 CYCSP30-201ENST00000546447 172 ntBASIC4.46□□□□□ -1.7
SOX1O00570 MED28P6-201ENST00000558776 231 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX1O00570 AC104984.5-201ENST00000586878 94 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AP002826.1-201ENST00000608835 315 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC011476.5-201ENST00000615594 130 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC027309.3-201ENST00000623419 351 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC093535.2-201ENST00000624769 2326 ntBASIC4.46□□□□□ -1.7
SOX1O00570 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX1O00570 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX1O00570 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX1O00570 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX1O00570 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 RNU6-1159P-201ENST00000362933 107 ntBASIC4.45□□□□□ -1.7
SOX1O00570 RNU6-682P-201ENST00000363843 106 ntBASIC4.45□□□□□ -1.7
SOX1O00570 Y_RNA.291-201ENST00000364886 113 ntBASIC4.45□□□□□ -1.7
SOX1O00570 RNU6-326P-201ENST00000365480 107 ntBASIC4.45□□□□□ -1.7
SOX1O00570 RNU6-17P-201ENST00000384245 107 ntBASIC4.45□□□□□ -1.7
SOX1O00570 RNU6-18P-201ENST00000384527 107 ntBASIC4.45□□□□□ -1.7
SOX1O00570 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.45□□□□□ -1.7
SOX1O00570 Y_RNA.626-201ENST00000411288 95 ntBASIC4.45□□□□□ -1.7
SOX1O00570 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.45□□□□□ -1.7
SOX1O00570 AL035423.1-201ENST00000420331 213 ntBASIC4.45□□□□□ -1.7
SOX1O00570 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX1O00570 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX1O00570 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX1O00570 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX1O00570 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX1O00570 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.45□□□□□ -1.7
SOX1O00570 RNA5SP165-201ENST00000517142 115 ntBASIC4.45□□□□□ -1.7
SOX1O00570 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX1O00570 MIR6715B-201ENST00000637172 77 ntBASIC4.45□□□□□ -1.7
SOX1O00570 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.45□□□□□ -1.7
SOX1O00570 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SOX1O00570 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.45□□□□□ -1.7
SOX1O00570 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
SOX1O00570 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX1O00570 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
SOX1O00570 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.44□□□□□ -1.7
SOX1O00570 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX1O00570 RNU6-78P-201ENST00000362897 107 ntBASIC4.44□□□□□ -1.7
SOX1O00570 RNU2-68P-201ENST00000410878 191 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AC098831.1-201ENST00000440661 216 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AC009296.1-201ENST00000443146 155 ntBASIC4.44□□□□□ -1.7
SOX1O00570 TMSB4XP3-201ENST00000445144 114 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.44□□□□□ -1.7
SOX1O00570 RPL23AP75-201ENST00000491601 451 ntBASIC4.44□□□□□ -1.7
SOX1O00570 UBE2CP3-201ENST00000502715 450 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.44□□□□□ -1.7
SOX1O00570 RNA5SP249-201ENST00000516127 99 ntBASIC4.44□□□□□ -1.7
SOX1O00570 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AC010928.2-201ENST00000588017 287 ntBASIC4.44□□□□□ -1.7
SOX1O00570 SNORD113-5-201ENST00000607261 78 ntBASIC4.44□□□□□ -1.7
SOX1O00570 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.44□□□□□ -1.7
SOX1O00570 SCARNA4-202ENST00000625402 129 ntBASIC4.44□□□□□ -1.7
SOX1O00570 SCARNA4-201ENST00000629045 128 ntBASIC4.44□□□□□ -1.7
SOX1O00570 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.44□□□□□ -1.7
SOX1O00570 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.44□□□□□ -1.7
SOX1O00570 AL356489.2-201ENST00000566968 3528 ntBASIC4.44□□□□□ -1.7
SOX1O00570 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SOX1O00570 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms