Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC092376.2-201ENST00000622621 4116 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 RNU6-1010P-201ENST00000362757 107 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 MIR1185-2-201ENST00000408687 86 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 HSPE1P12-201ENST00000412576 301 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AL135786.1-201ENST00000415892 214 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AL162739.1-201ENST00000450606 307 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC105137.1-201ENST00000484355 562 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC011602.1-201ENST00000546484 331 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC010547.6-201ENST00000571789 193 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 RNU6-91P-201ENST00000607774 107 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 AC068254.2-201ENST00000623938 3577 ntBASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SPDYE4A6NLX3 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 SNORA74A-201ENST00000364089 198 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AL133475.1-201ENST00000404414 305 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 RPS27P18-201ENST00000431701 247 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AL121890.1-201ENST00000435457 205 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 HMGN2P32-201ENST00000444648 269 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 OR2AO1P-201ENST00000476497 403 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AC023424.1-201ENST00000496058 459 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 RNU6-638P-201ENST00000516582 104 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AC211433.2-201ENST00000608433 387 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 MIR6133-201ENST00000617057 108 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 AL137067.2-201ENST00000621202 131 ntBASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC6.36□□□□□ -1.39
SPDYE4A6NLX3 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 RPL23P2-201ENST00000320371 421 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 AC079741.1-201ENST00000321498 212 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 Y_RNA.328-201ENST00000365208 113 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 MIR586-201ENST00000385035 97 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 GPS2P1-201ENST00000411761 986 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 AL445584.1-201ENST00000431451 330 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 RPS3P1-201ENST00000456781 192 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 AC126615.2-201ENST00000553003 515 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 TLK1P1-201ENST00000456760 2440 ntBASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.35□□□□□ -1.39
SPDYE4A6NLX3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AC007656.2-201ENST00000624902 4547 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 RNU6-271P-201ENST00000363858 105 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 DYNLT3P1-201ENST00000378574 347 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 RNU6-748P-201ENST00000384648 107 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AL355796.1-201ENST00000406706 323 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 MIR1302-5-201ENST00000408164 150 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 MIR1178-201ENST00000408396 91 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 MTATP6P21-201ENST00000440681 189 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 RPL23AP62-201ENST00000463396 453 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 RN7SL269P-201ENST00000467795 305 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 HSPE1P18-201ENST00000517602 280 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 MIR4505-201ENST00000582238 73 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 AL596211.1-201ENST00000569873 2277 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 Z73965.1-201ENST00000623412 2297 ntBASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SPDYE4A6NLX3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SPDYE4A6NLX3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
SPDYE4A6NLX3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
SPDYE4A6NLX3 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 156.1 ms