Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
RNF43Q68DV7 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 RNU6-525P-201ENST00000363685 104 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 Y_RNA.286-201ENST00000364813 102 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 RNU6-326P-201ENST00000365480 107 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 Y_RNA.497-201ENST00000384447 98 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 SNORD20-201ENST00000384550 80 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 PTMAP2-201ENST00000397627 327 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 EIF4A1P11-201ENST00000451239 222 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 RN7SL812P-201ENST00000493791 279 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 Y_RNA.706-201ENST00000516933 99 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 RNU6-840P-201ENST00000517275 65 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 TRAV37-201ENST00000553906 342 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 H3F3AP1-201ENST00000559984 334 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 MIR4286-201ENST00000580651 93 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 MIR4282-201ENST00000583613 67 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC091895.1-201ENST00000624494 256 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 Z99571.1-201ENST00000636677 394 ntBASIC4.48□□□□□ -1.69
RNF43Q68DV7 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF43Q68DV7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF43Q68DV7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF43Q68DV7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF43Q68DV7 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF43Q68DV7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF43Q68DV7 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 Y_RNA.333-201ENST00000365274 102 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 RNA5SP283-201ENST00000365604 119 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 SNORD63-201ENST00000384262 68 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 Y_RNA.629-201ENST00000411368 105 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 SNORD56-201ENST00000413522 71 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AL157831.1-201ENST00000426134 473 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AL592045.1-201ENST00000429867 352 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC140059.1-201ENST00000489238 361 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AL132838.2-201ENST00000492041 314 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 ANXA2P1-201ENST00000505539 926 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AL592156.1-201ENST00000508758 304 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 RNY3P16-201ENST00000516338 101 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF43Q68DV7 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC103996.1-201ENST00000555468 102 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 RPL23AP78-201ENST00000599928 470 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 MIR432-201ENST00000606207 94 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 FAM27D1-201ENST00000612308 341 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC007546.2-201ENST00000623996 360 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC112484.5-201ENST00000624189 228 ntBASIC4.47□□□□□ -1.69
RNF43Q68DV7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
RNF43Q68DV7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF43Q68DV7 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
RNF43Q68DV7 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
RNF43Q68DV7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
RNF43Q68DV7 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 MIR372-201ENST00000362225 67 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 MIR208A-201ENST00000362287 71 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 SNORD46.1-201ENST00000364139 104 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 RNU6-1130P-201ENST00000365434 107 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 CYCSP19-201ENST00000411715 316 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 AL358453.1-201ENST00000422522 250 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 RPL23AP83-201ENST00000434984 473 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 Y_RNA.638-201ENST00000459374 113 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 RNU7-175P-201ENST00000515915 61 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 AC008489.1-201ENST00000524271 483 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 AC037487.3-201ENST00000606668 112 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 AL021997.2-201ENST00000615674 271 ntBASIC4.46□□□□□ -1.7
RNF43Q68DV7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
RNF43Q68DV7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.46□□□□□ -1.7
RNF43Q68DV7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.45□□□□□ -1.7
RNF43Q68DV7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms