Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SOX4Q06945 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX4Q06945 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.4□□□□□ -1.71
SOX4Q06945 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX4Q06945 RNU6-173P-201ENST00000364215 104 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 Y_RNA.245-201ENST00000364493 95 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 RNU6-47P-201ENST00000383866 107 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 MIR34A-201ENST00000385130 110 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AL358453.1-201ENST00000422522 250 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 EIF1P2-201ENST00000428233 350 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 Z82188.1-201ENST00000436709 154 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX4Q06945 snoU13.30-201ENST00000458951 104 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX4Q06945 RN7SKP272-201ENST00000516988 232 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC022559.1-201ENST00000520905 205 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.39□□□□□ -1.71
SOX4Q06945 AC053481.4-201ENST00000583164 216 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC072026.1-201ENST00000605023 201 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC004832.4-201ENST00000608952 331 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 MIR6868-201ENST00000611215 58 ntBASIC4.39□□□□□ -1.71
SOX4Q06945 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.39□□□□□ -1.71
SOX4Q06945 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SOX4Q06945 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SOX4Q06945 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX4Q06945 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SOX4Q06945 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SOX4Q06945 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SOX4Q06945 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 DEFB108F-201ENST00000344638 222 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 RNU6-1020P-201ENST00000363684 107 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 RNU1-64P-201ENST00000365443 163 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 MIR613-201ENST00000385248 95 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 SNORA53-201ENST00000391141 249 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 SNORA40C-201ENST00000391285 128 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 RPS29P7-201ENST00000439662 171 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX4Q06945 MRPL42P6-201ENST00000486397 371 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 AL160314.1-201ENST00000490836 438 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.38□□□□□ -1.71
SOX4Q06945 RNU7-143P-201ENST00000516781 65 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 RNU4-60P-201ENST00000517239 135 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 MIR4286-201ENST00000580651 93 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.38□□□□□ -1.71
SOX4Q06945 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.38□□□□□ -1.71
SOX4Q06945 MIR6500-201ENST00000622700 86 ntBASIC4.38□□□□□ -1.71
SOX4Q06945 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SOX4Q06945 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SOX4Q06945 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX4Q06945 RNU6-740P-201ENST00000364734 105 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU6-336P-201ENST00000364891 107 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 Y_RNA.292-201ENST00000364904 97 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU4-9P-201ENST00000364951 139 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU5E-7P-201ENST00000365290 117 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU6-326P-201ENST00000365480 107 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU6-926P-201ENST00000384075 107 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 Y_RNA.504-201ENST00000384481 104 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
SOX4Q06945 HDGFP1-201ENST00000405943 252 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX4Q06945 AL691449.1-201ENST00000426570 421 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX4Q06945 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX4Q06945 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX4Q06945 RPS20P22-201ENST00000473700 357 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RPL7P47-201ENST00000497299 556 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 MLLT10P2-201ENST00000506434 249 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 SNORD116-28-201ENST00000516123 91 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 RNU6-346P-201ENST00000516288 111 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 SNORA31.19-201ENST00000517079 126 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 IFITM8P-201ENST00000522529 394 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX4Q06945 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.37□□□□□ -1.71
SOX4Q06945 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX4Q06945 AL162424.1-201ENST00000602325 221 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.37□□□□□ -1.71
SOX4Q06945 U4.7-201ENST00000638126 106 ntBASIC4.37□□□□□ -1.71
SOX4Q06945 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.37□□□□□ -1.71
SOX4Q06945 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
SOX4Q06945 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
SOX4Q06945 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX4Q06945 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SOX4Q06945 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX4Q06945 AL365440.1-201ENST00000436135 2167 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms