Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.91□□□□□ -1.78
ATF4P18848 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
ATF4P18848 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ATF4P18848 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.9□□□□□ -1.78
ATF4P18848 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.78
ATF4P18848 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
ATF4P18848 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
ATF4P18848 AC126755.2-208ENST00000327792 462 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AC138969.1-213ENST00000331436 462 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-212P-201ENST00000362642 104 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-1010P-201ENST00000362757 107 ntBASIC3.9□□□□□ -1.79
ATF4P18848 SNORA17.1-201ENST00000362945 126 ntBASIC3.9□□□□□ -1.79
ATF4P18848 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-799P-201ENST00000363567 107 ntBASIC3.9□□□□□ -1.79
ATF4P18848 U8.4-201ENST00000363626 134 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU4-50P-201ENST00000364361 141 ntBASIC3.9□□□□□ -1.79
ATF4P18848 SNORA2.3-201ENST00000383920 135 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-17P-201ENST00000384245 107 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-18P-201ENST00000384527 107 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-541P-201ENST00000384709 110 ntBASIC3.9□□□□□ -1.79
ATF4P18848 MIR1302-3-201ENST00000408128 138 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 CYCSP48-201ENST00000417124 323 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
ATF4P18848 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 AC093663.1-201ENST00000497190 394 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.9□□□□□ -1.79
ATF4P18848 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.9□□□□□ -1.79
ATF4P18848 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.9□□□□□ -1.79
ATF4P18848 RNU6-1198P-201ENST00000516904 67 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AL360157.1-201ENST00000565962 87 ntBASIC3.9□□□□□ -1.79
ATF4P18848 MIR4646-201ENST00000580775 63 ntBASIC3.9□□□□□ -1.79
ATF4P18848 MIR3136-201ENST00000583498 78 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AC010928.2-201ENST00000588017 287 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AL355297.3-201ENST00000604082 446 ntBASIC3.9□□□□□ -1.79
ATF4P18848 AL138963.2-201ENST00000605137 226 ntBASIC3.9□□□□□ -1.79
ATF4P18848 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.9□□□□□ -1.79
ATF4P18848 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATF4P18848 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATF4P18848 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
ATF4P18848 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.9□□□□□ -1.79
ATF4P18848 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
ATF4P18848 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ATF4P18848 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
ATF4P18848 AC073073.2-201ENST00000609827 2578 ntBASIC3.89□□□□□ -1.79
ATF4P18848 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.89□□□□□ -1.79
ATF4P18848 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATF4P18848 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
ATF4P18848 RNU5B-2P-201ENST00000363036 113 ntBASIC3.89□□□□□ -1.79
ATF4P18848 Y_RNA.106-201ENST00000363189 100 ntBASIC3.89□□□□□ -1.79
ATF4P18848 Y_RNA.149-201ENST00000363558 117 ntBASIC3.89□□□□□ -1.79
ATF4P18848 Y_RNA.176-201ENST00000363815 109 ntBASIC3.89□□□□□ -1.79
ATF4P18848 SNORA51.11-201ENST00000384442 131 ntBASIC3.89□□□□□ -1.79
ATF4P18848 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.89□□□□□ -1.79
ATF4P18848 U3.36-201ENST00000408418 213 ntBASIC3.89□□□□□ -1.79
ATF4P18848 MIR1252-201ENST00000408861 65 ntBASIC3.89□□□□□ -1.79
ATF4P18848 AL590135.1-201ENST00000422215 156 ntBASIC3.89□□□□□ -1.79
ATF4P18848 AC019205.3-201ENST00000424573 156 ntBASIC3.89□□□□□ -1.79
ATF4P18848 AC016700.2-201ENST00000446011 156 ntBASIC3.89□□□□□ -1.79
ATF4P18848 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.89□□□□□ -1.79
ATF4P18848 AF186996.7-201ENST00000492781 209 ntBASIC3.89□□□□□ -1.79
ATF4P18848 RNA5SP373-201ENST00000517271 95 ntBASIC3.89□□□□□ -1.79
ATF4P18848 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.89□□□□□ -1.79
ATF4P18848 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.89□□□□□ -1.79
ATF4P18848 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.89□□□□□ -1.79
ATF4P18848 AL049539.1-201ENST00000611964 459 ntBASIC3.89□□□□□ -1.79
ATF4P18848 MIR8058-201ENST00000615737 89 ntBASIC3.89□□□□□ -1.79
ATF4P18848 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.89□□□□□ -1.79
ATF4P18848 AP002799.1-201ENST00000623552 423 ntBASIC3.89□□□□□ -1.79
ATF4P18848 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
ATF4P18848 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
ATF4P18848 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
ATF4P18848 ZNF962P-201ENST00000443465 3140 ntBASIC3.88□□□□□ -1.79
ATF4P18848 GABRG2-229ENST00000641017 3628 ntBASIC3.88□□□□□ -1.79
ATF4P18848 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATF4P18848 MIR423-201ENST00000362201 94 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNU6-874P-201ENST00000362390 105 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNA5SP322-201ENST00000363617 119 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNU1-32P-201ENST00000363937 159 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNU6-196P-201ENST00000384315 107 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNU6-463P-201ENST00000384340 107 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RNU6-1140P-201ENST00000410517 106 ntBASIC3.88□□□□□ -1.79
ATF4P18848 HMGB3P2-201ENST00000411913 584 ntBASIC3.88□□□□□ -1.79
ATF4P18848 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.88□□□□□ -1.79
ATF4P18848 AP001324.2-201ENST00000461163 319 ntBASIC3.88□□□□□ -1.79
ATF4P18848 MTATP8P1-201ENST00000467115 207 ntBASIC3.88□□□□□ -1.79
ATF4P18848 RN7SL441P-201ENST00000492388 296 ntBASIC3.88□□□□□ -1.79
ATF4P18848 Y_RNA.715-201ENST00000517082 110 ntBASIC3.88□□□□□ -1.79
ATF4P18848 AC090617.3-201ENST00000573670 475 ntBASIC3.88□□□□□ -1.79
ATF4P18848 AC024940.4-201ENST00000605507 246 ntBASIC3.88□□□□□ -1.79
ATF4P18848 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.88□□□□□ -1.79
ATF4P18848 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.88□□□□□ -1.79
ATF4P18848 AK9-203ENST00000368948 2478 ntTSL 5 BASIC3.88□□□□□ -1.79
ATF4P18848 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
ATF4P18848 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.88□□□□□ -1.79
ATF4P18848 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms