Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 RNA5SP500-201ENST00000364486 119 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 TBCAP2-201ENST00000416175 326 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 AC009237.7-201ENST00000447357 229 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 AC006517.1-201ENST00000480485 328 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 RN7SL570P-201ENST00000484405 292 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 AC006380.1-201ENST00000603598 186 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 MIR3674-201ENST00000636576 68 ntBASIC6.2□□□□□ -1.42
RTN4Q9NQC3 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RTN4Q9NQC3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AL159987.1-201ENST00000347911 293 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 RNU6-1264P-201ENST00000383891 107 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AL357515.1-201ENST00000402967 542 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC140479.3-201ENST00000418944 1126 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 Z98742.2-201ENST00000431564 187 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 MTND5P15-201ENST00000434246 349 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 RN7SL193P-201ENST00000491708 276 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 RN7SKP238-201ENST00000516483 249 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 SCARNA11.3-201ENST00000517276 130 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 SNORA81.3-201ENST00000517283 198 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC011471.1-201ENST00000585766 187 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 MIR6793-201ENST00000612376 63 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 AC245014.3-201ENST00000618589 347 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.19□□□□□ -1.42
RTN4Q9NQC3 MUC2-202ENST00000613187 4845 ntBASIC6.19□□□□□ -1.42
RTN4Q9NQC3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RN7SKP250-201ENST00000363924 321 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RNU1-132P-201ENST00000364300 164 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 Y_RNA.286-201ENST00000364813 102 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 MIR1183-201ENST00000408856 89 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 EIF4EP4-201ENST00000424916 578 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC027124.2-201ENST00000428249 105 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC005154.2-201ENST00000438110 379 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC004386.2-201ENST00000441858 148 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AZGP1P2-201ENST00000454506 345 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC010326.1-201ENST00000462726 602 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 COX6CP14-201ENST00000469580 174 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AL122020.1-201ENST00000472287 459 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC098847.1-201ENST00000473094 348 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RPS17P15-201ENST00000475609 349 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RN7SL568P-201ENST00000493069 298 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC018797.1-201ENST00000510791 255 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 MIR6889-201ENST00000613185 59 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 UCA1.1-201ENST00000620952 75 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 AC008785.1-201ENST00000624475 456 ntBASIC6.18□□□□□ -1.42
RTN4Q9NQC3 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC6.18□□□□□ -1.42
RTN4Q9NQC3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 Y_RNA.383-201ENST00000383855 97 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 RNU6-1027P-201ENST00000383998 107 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 RNU6-209P-201ENST00000384118 107 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC017079.2-201ENST00000416102 485 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 NXT1P1-201ENST00000458481 316 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC011276.1-201ENST00000469688 323 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 RN7SL132P-201ENST00000478131 296 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC098818.1-201ENST00000478593 252 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 SCARNA18.1-201ENST00000516330 83 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 RNA5SP340-201ENST00000517132 107 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC021678.3-201ENST00000517893 476 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 MIR5006-201ENST00000583027 110 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AL512605.2-201ENST00000592972 256 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AL049539.1-201ENST00000611964 459 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC110079.1-202ENST00000635213 138 ntBASIC6.17□□□□□ -1.42
RTN4Q9NQC3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.17□□□□□ -1.42
RTN4Q9NQC3 AC092593.1-201ENST00000515413 1815 ntBASIC6.16□□□□□ -1.42
RTN4Q9NQC3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTN4Q9NQC3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms