Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 SSXP4-201ENST00000451349 245 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 SCARNA10-201ENST00000459255 330 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC073901.1-201ENST00000462471 408 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RPL23AP14-201ENST00000468281 468 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 COX6CP14-201ENST00000469580 174 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC091979.2-201ENST00000607514 214 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 FTX_3.1-201ENST00000610451 147 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 AC091905.2-201ENST00000623143 306 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 U3.53-201ENST00000628922 216 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 BMS1P21-201ENST00000634565 365 ntBASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
BHLHE41Q9C0J9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.34□□□□□ -1.72
BHLHE41Q9C0J9 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.34□□□□□ -1.72
BHLHE41Q9C0J9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 SDAD1P1-202ENST00000524156 2051 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 ZNF137P-201ENST00000456718 1920 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 SNORD56.1-201ENST00000362913 68 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-942P-201ENST00000363002 107 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.292-201ENST00000364904 97 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RNA5SP151-201ENST00000365632 117 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 MIR518D-201ENST00000385014 87 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 SDHCP2-201ENST00000398565 501 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AC016397.1-201ENST00000412463 242 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 FAR2P2-201ENST00000413041 594 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RPL26P27-201ENST00000414397 437 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AC117440.1-201ENST00000474107 571 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AC109925.1-201ENST00000478069 331 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RPL30P5-201ENST00000494923 336 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RNA5SP360-201ENST00000516555 118 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RN7SKP49-201ENST00000516675 260 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-861P-201ENST00000516745 106 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 MIR4330-201ENST00000579077 105 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AL023881.1-201ENST00000621088 301 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 OR14L1P-202ENST00000641545 3009 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 AC090740.1-201ENST00000623193 2262 ntBASIC4.33□□□□□ -1.72
BHLHE41Q9C0J9 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-858P-201ENST00000362436 107 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-682P-201ENST00000363843 106 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 SNORA71.2-201ENST00000364941 134 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNY4P28-201ENST00000365281 93 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.506-201ENST00000384494 102 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-125P-201ENST00000384505 107 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 MTHFD2P2-201ENST00000407725 247 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNU2-61P-201ENST00000411069 191 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC245028.1-201ENST00000423259 256 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC098831.1-201ENST00000440661 216 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC010326.1-201ENST00000462726 602 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 MRPL42P6-201ENST00000486397 371 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 IGLV2-34-201ENST00000490007 283 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 SNORD116-28-201ENST00000516123 91 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-1278P-201ENST00000516130 107 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC016256.1-201ENST00000547971 354 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AK6P2-201ENST00000549020 471 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RN7SL52P-201ENST00000584271 284 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC019159.1-201ENST00000605094 187 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AL356157.2-201ENST00000605122 111 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AL138963.2-201ENST00000605137 226 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RN7SL722P-201ENST00000617780 284 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RN7SL565P-201ENST00000618246 284 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 MIR6853-201ENST00000619642 74 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 AC008785.1-201ENST00000624475 456 ntBASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
BHLHE41Q9C0J9 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 SRP72P2-201ENST00000344851 1979 ntBASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
BHLHE41Q9C0J9 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms