Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AC003071.2-201ENST00000423857 315 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AP1B1P1-202ENST00000448124 191 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL89P-201ENST00000480252 283 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RPS10P20-201ENST00000494130 463 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AC120036.3-201ENST00000517826 292 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 MIR548AD-201ENST00000584780 82 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 FARSA-AS1-201ENST00000592636 241 ntTSL 5 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RPL12P50-201ENST00000603116 116 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AL662814.1-201ENST00000617364 121 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RNA5SP196-201ENST00000625967 102 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 CDK19-203ENST00000413605 6007 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 SLC11A2-201ENST00000262051 3986 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 A2MP1-204ENST00000566278 4130 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 MMS22L-201ENST00000275053 8643 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-862P-201ENST00000362804 105 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 BMPR2-202ENST00000374580 11461 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-1083P-201ENST00000384022 107 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RNA5SP109-201ENST00000391010 116 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 U8.16-201ENST00000391279 133 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 MIR548F3-201ENST00000408509 87 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 DDX11L10-201ENST00000430178 571 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL145P-201ENST00000469955 296 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL413P-201ENST00000482700 297 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-980P-201ENST00000516925 103 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 OR7E96P-201ENST00000530816 976 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 MIR4664-201ENST00000583819 71 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 AC007136.1-201ENST00000589141 199 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-92P-201ENST00000605893 104 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL3-201ENST00000610674 299 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 U4.6-201ENST00000621618 127 ntBASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KRTAP3-3Q9BYR6 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
KRTAP3-3Q9BYR6 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 BUB1-202ENST00000409311 3287 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 SPATA19-201ENST00000299140 861 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 SNORA70G-201ENST00000383923 142 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 AC079355.1-201ENST00000421770 223 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 RN7SL233P-201ENST00000469988 277 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 AC040975.1-201ENST00000472104 316 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 RNU7-12P-201ENST00000516030 62 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 MIR6745-201ENST00000612694 127 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 DLEU2_3.1-201ENST00000620005 73 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 AC034229.6-201ENST00000623704 224 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 SCARNA15.3-201ENST00000626315 122 ntBASIC3.58□□□□□ -1.84
KRTAP3-3Q9BYR6 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms