Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 Z75746.1-201ENST00000440243 2080 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC011266.1-201ENST00000624119 3569 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.183-201ENST00000363882 113 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-827P-201ENST00000365553 106 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.416-201ENST00000384014 113 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 RNU2-25P-201ENST00000411041 191 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC096920.1-201ENST00000423991 241 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 RPL26P6-201ENST00000440913 438 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 RNU7-87P-201ENST00000459343 62 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 snoU13.3-201ENST00000459441 104 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AP001486.1-201ENST00000463339 476 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 RPL7P5-201ENST00000471472 736 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC074250.1-201ENST00000511117 192 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 SNORA81.3-201ENST00000517283 198 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AL121603.1-201ENST00000553815 142 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 TRAV37-201ENST00000553906 342 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 MIR4458-201ENST00000578872 75 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC107294.1-201ENST00000609524 467 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AC015813.4-201ENST00000610469 179 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 MIR6868-201ENST00000611215 58 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 AL121772.2-201ENST00000614331 297 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 LINC01109-201ENST00000603837 3081 ntBASIC4.62□□□□□ -1.67
SYNGAP1Q96PV0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 MAPK10-372ENST00000641954 3413 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RNU1-76P-201ENST00000362903 159 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.270-201ENST00000364693 104 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.592-201ENST00000410274 109 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-1025P-201ENST00000410629 104 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RNA5SP494-201ENST00000410653 129 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RNA5SP104-201ENST00000410989 118 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RPEP5-201ENST00000441137 268 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RPL29P14-201ENST00000495837 428 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-789P-201ENST00000517105 102 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 AC034114.1-201ENST00000520293 285 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 AL157871.3-201ENST00000557231 293 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 HMGB1P14-201ENST00000557424 591 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 MIR1273C-201ENST00000578669 77 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 Z82217.1-201ENST00000625157 8149 ntBASIC4.61□□□□□ -1.67
SYNGAP1Q96PV0 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AL391987.6-201ENST00000305671 199 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AC007685.1-201ENST00000329806 452 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 MIR448-201ENST00000362131 111 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.33-201ENST00000362591 102 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.150-201ENST00000363562 102 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.462-201ENST00000384268 102 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 SNORA36C-201ENST00000384289 132 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-121P-201ENST00000410525 99 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AL160275.2-201ENST00000412010 394 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AP000907.1-201ENST00000428428 510 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AC087650.1-201ENST00000431445 468 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 MYL8P-204ENST00000431574 518 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AC010469.1-201ENST00000463864 576 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 HMGN1P11-201ENST00000508668 303 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-927P-201ENST00000516199 100 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AC109329.1-201ENST00000518744 317 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 DEFB108E-201ENST00000524692 240 ntBASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
SYNGAP1Q96PV0 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 Y_RNA.84-201ENST00000363011 104 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-774P-201ENST00000363238 107 ntBASIC4.59□□□□□ -1.67
SYNGAP1Q96PV0 RNU6-280P-201ENST00000364145 104 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms