Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AL391358.1-201ENST00000605342 190 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 AC092628.2-201ENST00000622492 339 ntBASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LYSMD3Q7Z3D4 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-137P-201ENST00000363680 108 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RNVU1-6-201ENST00000364688 164 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 SNORA72.2-201ENST00000365028 127 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SKP100-201ENST00000411258 284 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 AC016397.1-201ENST00000412463 242 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 CKS1BP6-201ENST00000424932 240 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 PTGES3P4-201ENST00000426243 356 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 TDGF1P1-201ENST00000445734 527 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RPL31P13-201ENST00000484151 370 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 SCARNA22-201ENST00000503991 125 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RN7SKP276-201ENST00000516242 268 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RNU6-1256P-201ENST00000516539 103 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RNA5SP170-201ENST00000517150 101 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 SNORD84-203ENST00000584275 78 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 AC110491.1-201ENST00000562191 2010 ntBASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.78□□□□□ -1.64
LYSMD3Q7Z3D4 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
LYSMD3Q7Z3D4 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.65
LYSMD3Q7Z3D4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 DEFB108F-201ENST00000344638 222 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-1255P-201ENST00000363434 112 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-1056P-201ENST00000383996 107 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 MIR141-201ENST00000384975 95 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 EBAG9P1-201ENST00000418955 543 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC007919.1-201ENST00000429380 217 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 RPL12P46-201ENST00000436610 195 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC243964.1-201ENST00000441814 261 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC010095.1-201ENST00000443543 144 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 RPS29P33-201ENST00000456717 146 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC108751.2-201ENST00000469993 231 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 RNU1-6P-201ENST00000516290 144 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 SNORA43.2-201ENST00000516652 128 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 MIR4431-201ENST00000579990 94 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AL590392.1-201ENST00000604960 446 ntBASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
LYSMD3Q7Z3D4 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 RNU6-173P-201ENST00000364215 104 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 Y_RNA.542-201ENST00000384641 111 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 MIR153-1-201ENST00000384914 90 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 MTHFD2P2-201ENST00000407725 247 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC098614.2-201ENST00000426040 255 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 RPS20P10-201ENST00000451209 253 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC009220.1-201ENST00000451614 275 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC079168.2-201ENST00000453977 416 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 AC022616.8-201ENST00000533569 253 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 ZNF192P1-203ENST00000565888 810 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 RN7SL176P-201ENST00000580352 264 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 DNAJC19P2-201ENST00000593340 302 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 uc_338.18-201ENST00000615451 175 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.76□□□□□ -1.65
LYSMD3Q7Z3D4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms