Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRPF1P55201 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.65□□□□□ -1.51
BRPF1P55201 AL353743.1-202ENST00000431724 1695 ntBASIC5.65□□□□□ -1.51
BRPF1P55201 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRPF1P55201 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRPF1P55201 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.51
BRPF1P55201 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
BRPF1P55201 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 OFD1P6Y-202ENST00000451061 2724 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 SNORA62.3-201ENST00000365110 153 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 RNU6-1286P-201ENST00000383871 107 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 RPL21P40-201ENST00000428586 483 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 MTCO3P29-201ENST00000432119 779 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC5.64□□□□□ -1.51
BRPF1P55201 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 HMGN2P10-201ENST00000448085 265 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.64□□□□□ -1.51
BRPF1P55201 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 AC023632.4-201ENST00000517783 191 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC109329.1-201ENST00000518744 317 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 AL442163.3-201ENST00000554110 156 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 RMST_6.1-201ENST00000611980 203 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC097372.5-201ENST00000623665 376 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 AC091903.1-201ENST00000624322 454 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 MIR3199-2-201ENST00000636243 86 ntBASIC5.64□□□□□ -1.51
BRPF1P55201 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.64□□□□□ -1.51
BRPF1P55201 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRPF1P55201 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
BRPF1P55201 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
BRPF1P55201 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 RNU6-770P-201ENST00000363929 105 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 Y_RNA.461-201ENST00000384263 103 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 RNU2-64P-201ENST00000411315 191 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 AC074117.2-201ENST00000417130 397 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 AC243964.1-201ENST00000441814 261 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC5.63□□□□□ -1.51
BRPF1P55201 MRPL42P6-201ENST00000486397 371 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 SCARNA13-201ENST00000516672 275 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 AC125232.2-201ENST00000592457 143 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 RAC1P9-201ENST00000604990 392 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 AC103858.2-201ENST00000621471 543 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 AC068254.2-201ENST00000623938 3577 ntBASIC5.63□□□□□ -1.51
BRPF1P55201 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.63□□□□□ -1.51
BRPF1P55201 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
BRPF1P55201 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.63□□□□□ -1.51
BRPF1P55201 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BRPF1P55201 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF1P55201 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC5.62□□□□□ -1.51
BRPF1P55201 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF1P55201 SNORD56.1-201ENST00000362913 68 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 SNORD115-32-201ENST00000364079 82 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 Y_RNA.358-201ENST00000365491 99 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 RNU6-1062P-201ENST00000383908 107 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 RNU6-611P-201ENST00000384276 104 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
BRPF1P55201 AL358453.1-201ENST00000422522 250 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 AP000907.1-201ENST00000428428 510 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.62□□□□□ -1.51
BRPF1P55201 RN7SL542P-201ENST00000467147 294 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 RNU2-53P-201ENST00000516257 147 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 AC100770.1-201ENST00000532310 322 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC5.62□□□□□ -1.51
BRPF1P55201 AL160290.3-201ENST00000604869 165 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 AL021997.2-201ENST00000615674 271 ntBASIC5.62□□□□□ -1.51
BRPF1P55201 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF1P55201 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
BRPF1P55201 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF1P55201 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF1P55201 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.62□□□□□ -1.51
BRPF1P55201 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
BRPF1P55201 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF1P55201 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF1P55201 Y_RNA.183-201ENST00000363882 113 ntBASIC5.61□□□□□ -1.51
BRPF1P55201 Y_RNA.214-201ENST00000364201 112 ntBASIC5.61□□□□□ -1.51
BRPF1P55201 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
BRPF1P55201 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
BRPF1P55201 Y_RNA.447-201ENST00000384184 113 ntBASIC5.61□□□□□ -1.51
BRPF1P55201 RNU1-13P-201ENST00000384499 162 ntBASIC5.61□□□□□ -1.51
BRPF1P55201 MIR554-201ENST00000384874 96 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms