Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.14□□□□□ -1.91
NR1H2P55055 AC093536.2-201ENST00000565257 1406 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 SNORD9-201ENST00000362566 104 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RNU6-371P-201ENST00000364283 108 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.14□□□□□ -1.91
NR1H2P55055 RNU6-1179P-201ENST00000384667 107 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 SNORA46-201ENST00000384762 135 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 SNRPEP10-201ENST00000420249 274 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.14□□□□□ -1.91
NR1H2P55055 SAR1AP4-201ENST00000429225 591 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AC097713.2-201ENST00000430199 356 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RNU7-180P-201ENST00000459240 63 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RPS29P25-201ENST00000481709 171 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AC022493.1-201ENST00000492984 337 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.14□□□□□ -1.91
NR1H2P55055 MTCO3P9-201ENST00000506989 781 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NR1H2P55055 AC112206.3-201ENST00000514578 389 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RNU6-1178P-201ENST00000516674 107 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RN7SKP57-201ENST00000517248 293 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AL121821.2-201ENST00000556081 394 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.14□□□□□ -1.91
NR1H2P55055 AL138976.2-201ENST00000563989 694 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 MIR5583-1-201ENST00000580941 59 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 MIR3941-201ENST00000582572 103 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AC010525.2-201ENST00000590920 195 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 NRBF2P5-201ENST00000603087 788 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 AL391813.1-201ENST00000603098 260 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 RMST_3.1-201ENST00000611651 109 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NR1H2P55055 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
NR1H2P55055 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.14□□□□□ -1.91
NR1H2P55055 Z83843.1-201ENST00000604070 3685 ntBASIC3.14□□□□□ -1.91
NR1H2P55055 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 RNA5SP267-201ENST00000364893 126 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 RNU6-1280P-201ENST00000365211 107 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 RNU6-19P-201ENST00000384718 107 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 MIR128-1-201ENST00000384921 82 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 EEF1A1P40-201ENST00000412883 573 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.13□□□□□ -1.91
NR1H2P55055 MTND3P16-201ENST00000452205 344 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 AL583843.1-201ENST00000456070 346 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 SCARNA18-201ENST00000459004 134 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 SCARNA11.3-201ENST00000517276 130 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.13□□□□□ -1.91
NR1H2P55055 MTND4P7-201ENST00000523876 130 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 AL137161.1-201ENST00000532231 390 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.13□□□□□ -1.91
NR1H2P55055 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.13□□□□□ -1.91
NR1H2P55055 AL020991.1-201ENST00000612314 373 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 AL355365.1-201ENST00000616480 294 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 uc_338.34-201ENST00000617467 174 ntBASIC3.13□□□□□ -1.91
NR1H2P55055 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.13□□□□□ -1.91
NR1H2P55055 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NR1H2P55055 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NR1H2P55055 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
NR1H2P55055 OR4G1P-203ENST00000641984 1631 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.12□□□□□ -1.91
NR1H2P55055 RNU4-66P-201ENST00000365199 138 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 MIR634-201ENST00000385208 97 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NR1H2P55055 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NR1H2P55055 AL122016.1-201ENST00000403365 367 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 BX323014.1-201ENST00000412876 237 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.12□□□□□ -1.91
NR1H2P55055 AC245054.2-201ENST00000415639 319 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 RPL21P90-201ENST00000415692 466 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 PTGES3P4-201ENST00000426243 356 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
NR1H2P55055 RPL31P58-201ENST00000469001 379 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 MRPS36P2-201ENST00000512569 299 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 SNORA70.18-201ENST00000516696 98 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.12□□□□□ -1.91
NR1H2P55055 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 MIR4424-201ENST00000585257 86 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.12□□□□□ -1.91
NR1H2P55055 AC006557.5-201ENST00000603126 811 ntBASIC3.12□□□□□ -1.91
NR1H2P55055 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.12□□□□□ -1.91
NR1H2P55055 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.12□□□□□ -1.91
NR1H2P55055 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
NR1H2P55055 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.12□□□□□ -1.91
NR1H2P55055 AC004520.1-201ENST00000608362 1413 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NR1H2P55055 RNU6-715P-201ENST00000365204 103 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 RNU4-20P-201ENST00000365601 151 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 RNU6-1083P-201ENST00000384022 107 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 RNU6-38P-201ENST00000384085 107 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 RNU6-1127P-201ENST00000384580 107 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 MIR578-201ENST00000384828 96 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NR1H2P55055 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.11□□□□□ -1.91
NR1H2P55055 RAP1BP3-201ENST00000407180 549 ntBASIC3.11□□□□□ -1.91
NR1H2P55055 RN7SKP220-201ENST00000410611 288 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 133.9 ms