Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AL161629.2-201ENST00000615347 275 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 HMGB1P24-202ENST00000615653 685 ntBASIC4.22□□□□□ -1.73
ITGA4P13612 NAA50-211ENST00000630058 177 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGA4P13612 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ITGA4P13612 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.22□□□□□ -1.73
ITGA4P13612 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.73
ITGA4P13612 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 SNORD14.1-201ENST00000365609 90 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 Y_RNA.380-201ENST00000365663 111 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 U1.1-201ENST00000384101 164 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 RNU6-166P-201ENST00000384371 107 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 Y_RNA.512-201ENST00000384518 102 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 RNU6-1222P-201ENST00000384615 107 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 MT-TG-201ENST00000387429 68 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AL117339.3-201ENST00000418733 162 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 U8.21-201ENST00000459536 136 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AC078918.1-201ENST00000498515 228 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 BTF3L4P4-201ENST00000506381 449 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AC026726.1-201ENST00000512859 601 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 RNU6-572P-201ENST00000516724 80 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 TRAV28-201ENST00000557548 323 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 MIR5188-201ENST00000583467 113 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 Z98751.3-201ENST00000604447 521 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 MIR486-1-201ENST00000612171 68 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 AC004852.3-201ENST00000614131 326 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.21□□□□□ -1.74
ITGA4P13612 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.21□□□□□ -1.74
ITGA4P13612 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.21□□□□□ -1.74
ITGA4P13612 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.21□□□□□ -1.74
ITGA4P13612 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
ITGA4P13612 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.21□□□□□ -1.74
ITGA4P13612 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
ITGA4P13612 AC008568.2-201ENST00000623862 2313 ntBASIC4.21□□□□□ -1.74
ITGA4P13612 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.2□□□□□ -1.74
ITGA4P13612 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 Y_RNA.188-201ENST00000363952 111 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 Y_RNA.210-201ENST00000364161 110 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 U8.11-201ENST00000384699 133 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 U8.12-201ENST00000384701 133 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 RPL21P66-201ENST00000426566 466 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.2□□□□□ -1.74
ITGA4P13612 RPL21P2-201ENST00000440049 481 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AC009237.8-201ENST00000445492 379 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 ANP32BP2-201ENST00000454525 545 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 U8.18-201ENST00000459285 133 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AC078817.1-201ENST00000492623 435 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC4.2□□□□□ -1.74
ITGA4P13612 AL645944.1-201ENST00000603857 493 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AC004805.2-201ENST00000605382 482 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AC100812.1-201ENST00000607622 580 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AL021879.1-201ENST00000611756 288 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.2□□□□□ -1.74
ITGA4P13612 MIR1244-1-201ENST00000612829 85 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 AL138825.1-201ENST00000618587 192 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.2□□□□□ -1.74
ITGA4P13612 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.2□□□□□ -1.74
ITGA4P13612 MIR1244-3-201ENST00000635744 85 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 MIR1244-2-201ENST00000636449 85 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 MIR1244-4-202ENST00000636813 85 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.2□□□□□ -1.74
ITGA4P13612 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ITGA4P13612 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.2□□□□□ -1.74
ITGA4P13612 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
ITGA4P13612 AC007785.2-201ENST00000598627 1916 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ITGA4P13612 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.19□□□□□ -1.74
ITGA4P13612 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
ITGA4P13612 U3.42-201ENST00000408746 214 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 RNU2-68P-201ENST00000410878 191 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.19□□□□□ -1.74
ITGA4P13612 AL591419.1-201ENST00000427423 339 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ITGA4P13612 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 AL078601.1-201ENST00000444542 271 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC092798.1-201ENST00000458542 409 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 RNU7-169P-201ENST00000459456 61 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC091153.1-201ENST00000466297 402 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 AC034236.1-201ENST00000469891 373 ntBASIC4.19□□□□□ -1.74
ITGA4P13612 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.19□□□□□ -1.74
ITGA4P13612 SNORA40.14-201ENST00000516543 86 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms