Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 RPS20P22-201ENST00000473700 357 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RPS26P21-201ENST00000475397 348 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 AC109925.1-201ENST00000478069 331 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 SCARNA15.2-201ENST00000516409 127 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-1012P-201ENST00000516606 109 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-572P-201ENST00000516724 80 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 RNU6-861P-201ENST00000516745 106 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 AC022655.2-201ENST00000577280 318 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXD8P13378 Z83818.1-201ENST00000603584 150 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 AC024220.1-201ENST00000603675 484 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 MAPK10-320ENST00000641462 6696 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HOXD8P13378 AC009541.1-201ENST00000438279 2662 ntBASIC4.67□□□□□ -1.66
HOXD8P13378 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXD8P13378 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HOXD8P13378 RNU6-879P-201ENST00000364328 108 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 RNU6-336P-201ENST00000364891 107 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 RNU4-9P-201ENST00000364951 139 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 RNA5SP22-201ENST00000365393 109 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
HOXD8P13378 UBA52P6-201ENST00000399822 382 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 RPL23AP46-201ENST00000438548 490 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AL078601.1-201ENST00000444542 271 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 ANP32BP2-201ENST00000454525 545 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 snoU13.30-201ENST00000458951 104 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 Y_RNA.679-201ENST00000516416 91 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 RNU6-1212P-201ENST00000517023 104 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 SNORA31.18-201ENST00000517043 134 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AP004371.1-201ENST00000525240 214 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD8P13378 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD8P13378 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXD8P13378 AC005046.1-201ENST00000608515 625 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 MIR6875-201ENST00000617506 72 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AC006065.5-201ENST00000623427 349 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 AP001273.1-201ENST00000624493 3152 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXD8P13378 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.66□□□□□ -1.66
HOXD8P13378 AC004925.1-201ENST00000624256 2706 ntBASIC4.66□□□□□ -1.66
HOXD8P13378 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.65□□□□□ -1.66
HOXD8P13378 LINC01109-201ENST00000603837 3081 ntBASIC4.65□□□□□ -1.66
HOXD8P13378 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.65□□□□□ -1.66
HOXD8P13378 Y_RNA.122-201ENST00000363331 96 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 RNU6-514P-201ENST00000384208 107 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
HOXD8P13378 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 AC017079.2-201ENST00000416102 485 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD8P13378 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.65□□□□□ -1.67
HOXD8P13378 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 AL353705.4-201ENST00000449661 238 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD8P13378 AC013470.1-201ENST00000453438 462 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.65□□□□□ -1.67
HOXD8P13378 RPS29P19-201ENST00000479709 171 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 RNU4-60P-201ENST00000517239 135 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 AP006245.1-201ENST00000522549 120 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 MIR6075-201ENST00000620782 95 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD8P13378 AL161912.2-201ENST00000565707 3007 ntBASIC4.65□□□□□ -1.67
HOXD8P13378 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD8P13378 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
HOXD8P13378 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.65□□□□□ -1.67
HOXD8P13378 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXD8P13378 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXD8P13378 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
HOXD8P13378 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HOXD8P13378 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.64□□□□□ -1.67
HOXD8P13378 RNU6-1301P-201ENST00000362724 104 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 Y_RNA.76-201ENST00000362931 109 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 RNU6-527P-201ENST00000363425 104 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 RNU6-968P-201ENST00000384076 107 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 SNORD96B-201ENST00000386148 79 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 RNU6-1140P-201ENST00000410517 106 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 Y_RNA.626-201ENST00000411288 95 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.64□□□□□ -1.67
HOXD8P13378 RN7SL542P-201ENST00000467147 294 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 RPL23AP49-201ENST00000492925 468 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 AC139453.3-201ENST00000493276 369 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXD8P13378 SNORA31.20-201ENST00000517111 133 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.64□□□□□ -1.67
HOXD8P13378 AC120057.2-201ENST00000571520 271 ntBASIC4.64□□□□□ -1.67
HOXD8P13378 AC060766.3-201ENST00000591442 263 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 164.3 ms