Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AIMP1P2-201ENST00000425294 312 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RPL21P66-201ENST00000426566 466 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RPL36AP41-201ENST00000493820 306 ntBASIC5.41□□□□□ -1.54
RNF40O75150 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RNF40O75150 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC5.41□□□□□ -1.54
RNF40O75150 RNU6-1256P-201ENST00000516539 103 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RNU6-453P-201ENST00000516819 85 ntBASIC5.41□□□□□ -1.54
RNF40O75150 RNU2-56P-201ENST00000516826 190 ntBASIC5.41□□□□□ -1.54
RNF40O75150 CYCSP23-201ENST00000519781 313 ntBASIC5.41□□□□□ -1.54
RNF40O75150 AC022790.1-201ENST00000522872 204 ntBASIC5.41□□□□□ -1.54
RNF40O75150 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF40O75150 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC5.41□□□□□ -1.54
RNF40O75150 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.41□□□□□ -1.54
RNF40O75150 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.41□□□□□ -1.54
RNF40O75150 U73479.1-201ENST00000618062 168 ntBASIC5.41□□□□□ -1.54
RNF40O75150 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RNF40O75150 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.41□□□□□ -1.54
RNF40O75150 AP001273.1-201ENST00000624493 3152 ntBASIC5.41□□□□□ -1.54
RNF40O75150 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RNF40O75150 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF40O75150 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF40O75150 MTND5P35-201ENST00000557537 1720 ntBASIC5.4□□□□□ -1.54
RNF40O75150 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF40O75150 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RNF40O75150 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.4□□□□□ -1.54
RNF40O75150 SNORA25.7-201ENST00000364375 127 ntBASIC5.4□□□□□ -1.54
RNF40O75150 RNA5SP223-201ENST00000365174 120 ntBASIC5.4□□□□□ -1.54
RNF40O75150 Y_RNA.329-201ENST00000365209 107 ntBASIC5.4□□□□□ -1.54
RNF40O75150 RNU6-643P-201ENST00000384018 107 ntBASIC5.4□□□□□ -1.54
RNF40O75150 MIR600-201ENST00000385007 98 ntBASIC5.4□□□□□ -1.54
RNF40O75150 RPL26P27-201ENST00000414397 437 ntBASIC5.4□□□□□ -1.54
RNF40O75150 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC5.4□□□□□ -1.54
RNF40O75150 TDGF1P1-201ENST00000445734 527 ntBASIC5.4□□□□□ -1.54
RNF40O75150 AC011276.1-201ENST00000469688 323 ntBASIC5.4□□□□□ -1.54
RNF40O75150 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC5.4□□□□□ -1.54
RNF40O75150 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RNF40O75150 AP004607.1-201ENST00000524456 203 ntBASIC5.4□□□□□ -1.54
RNF40O75150 NDUFA5P6-201ENST00000542110 379 ntBASIC5.4□□□□□ -1.54
RNF40O75150 RN7SL356P-201ENST00000582228 248 ntBASIC5.4□□□□□ -1.54
RNF40O75150 AL391813.1-201ENST00000603098 260 ntBASIC5.4□□□□□ -1.54
RNF40O75150 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
RNF40O75150 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.55
RNF40O75150 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF40O75150 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
RNF40O75150 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF40O75150 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RNF40O75150 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
RNF40O75150 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RNF40O75150 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF40O75150 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
RNF40O75150 INTS6P1-201ENST00000504674 2530 ntBASIC5.39□□□□□ -1.55
RNF40O75150 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF40O75150 Y_RNA.572-201ENST00000384757 98 ntBASIC5.39□□□□□ -1.55
RNF40O75150 U3.32-201ENST00000408116 212 ntBASIC5.39□□□□□ -1.55
RNF40O75150 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF40O75150 AP000705.1-201ENST00000454567 350 ntBASIC5.39□□□□□ -1.55
RNF40O75150 RNU6-772P-201ENST00000516042 105 ntBASIC5.39□□□□□ -1.55
RNF40O75150 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF40O75150 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF40O75150 CYCSP39-201ENST00000565821 309 ntBASIC5.39□□□□□ -1.55
RNF40O75150 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF40O75150 AC091905.4-201ENST00000623432 202 ntBASIC5.39□□□□□ -1.55
RNF40O75150 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF40O75150 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF40O75150 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
RNF40O75150 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF40O75150 ZNF702P-202ENST00000434269 1966 ntBASIC5.38□□□□□ -1.55
RNF40O75150 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RNF40O75150 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.38□□□□□ -1.55
RNF40O75150 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF40O75150 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF40O75150 Z98749.2-208ENST00000381646 500 ntBASIC5.38□□□□□ -1.55
RNF40O75150 SNORA8.3-201ENST00000384679 139 ntBASIC5.38□□□□□ -1.55
RNF40O75150 RNU6-768P-201ENST00000384683 107 ntBASIC5.38□□□□□ -1.55
RNF40O75150 MIR616-201ENST00000385293 97 ntBASIC5.38□□□□□ -1.55
RNF40O75150 RPS26P42-201ENST00000413485 326 ntBASIC5.38□□□□□ -1.55
RNF40O75150 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF40O75150 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF40O75150 AC146507.2-201ENST00000460608 476 ntBASIC5.38□□□□□ -1.55
RNF40O75150 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF40O75150 RNU6-436P-201ENST00000516171 114 ntBASIC5.38□□□□□ -1.55
RNF40O75150 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF40O75150 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF40O75150 MIR4330-201ENST00000579077 105 ntBASIC5.38□□□□□ -1.55
RNF40O75150 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF40O75150 AL391903.3-201ENST00000612158 163 ntBASIC5.38□□□□□ -1.55
RNF40O75150 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.38□□□□□ -1.55
RNF40O75150 AC093535.2-201ENST00000624769 2326 ntBASIC5.38□□□□□ -1.55
RNF40O75150 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF40O75150 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF40O75150 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF40O75150 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF40O75150 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF40O75150 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF40O75150 DEFB108F-201ENST00000344638 222 ntBASIC5.37□□□□□ -1.55
RNF40O75150 RNU6-1048P-201ENST00000364054 107 ntBASIC5.37□□□□□ -1.55
RNF40O75150 RNU6-1180P-201ENST00000364935 107 ntBASIC5.37□□□□□ -1.55
RNF40O75150 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms