Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 FRG1KP-201ENST00000623592 341 ntBASIC2.04□□□□□ -2.08
KLHL28Q9NXS3 RNU6-253P-201ENST00000384730 105 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MIR221-201ENST00000385135 110 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MIR1302-8-201ENST00000408342 128 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AL008987.1-201ENST00000415528 237 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC005005.2-201ENST00000420779 380 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AIMP1P2-201ENST00000425294 312 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AL353777.1-201ENST00000425552 326 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC090515.1-201ENST00000465295 476 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC117503.1-201ENST00000472241 394 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 UBL5P3-201ENST00000475112 231 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC022493.1-201ENST00000492984 337 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC092436.1-201ENST00000506450 503 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 RNU6-311P-201ENST00000516224 102 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC012435.1-202ENST00000568772 240 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MIR1273D-201ENST00000577266 86 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AP000860.1-201ENST00000605250 559 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MIR5739-201ENST00000619803 80 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MIR7843-201ENST00000622274 79 ntBASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
KLHL28Q9NXS3 MTND5P6-201ENST00000422338 1798 ntBASIC2.03□□□□□ -2.09
KLHL28Q9NXS3 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 RNU5E-6P-201ENST00000365574 115 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 MIR676-201ENST00000390702 67 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 SNORA40C-201ENST00000391285 128 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 RNU2-40P-201ENST00000410833 196 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL591212.2-201ENST00000433923 257 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL353706.1-201ENST00000436728 494 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC018634.1-201ENST00000437554 401 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL078601.1-201ENST00000444542 271 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 BTF3P15-201ENST00000455606 336 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 RNA5SP233-201ENST00000459153 113 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 snoU13.15-201ENST00000459407 104 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC079804.2-201ENST00000490376 200 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 RNU6-1092P-201ENST00000516955 87 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 RNU6-1315P-201ENST00000517187 99 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 IGKV3-31-201ENST00000523109 329 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC105148.1-201ENST00000604961 409 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC022893.3-201ENST00000607665 437 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC103710.2-201ENST00000609912 942 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 AC093591.3-201ENST00000634516 308 ntBASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KLHL28Q9NXS3 CKAP2P1-201ENST00000555477 2049 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 Y_RNA.18-201ENST00000362461 102 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 MIR504-201ENST00000385065 83 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 U8.14-201ENST00000390843 143 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 EDDM3CP-201ENST00000415977 425 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 MTND2P9-201ENST00000422293 931 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC009238.1-201ENST00000442165 424 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC096638.1-201ENST00000444678 216 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC009237.6-201ENST00000446969 424 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC112771.1-201ENST00000463581 102 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC090255.1-201ENST00000495779 349 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 RNU6-914P-201ENST00000516749 109 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 RNU1-40P-201ENST00000516816 164 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 RNU1-97P-201ENST00000516872 164 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 RNU6-677P-201ENST00000516914 101 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AP001004.1-201ENST00000582468 324 ntBASIC2.01□□□□□ -2.09
KLHL28Q9NXS3 AL031281.1-201ENST00000604049 488 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms