Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR548AC-201ENST00000585049 88 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AL645944.1-201ENST00000603857 493 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 AC006133.1-201ENST00000617106 264 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 snoU18.1-201ENST00000629629 71 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 PCAT14-202ENST00000627127 3935 ntBASIC5.32□□□□□ -1.56
TRIM47Q96LD4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TRIM47Q96LD4 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AC092079.1-201ENST00000558620 1985 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.116-201ENST00000363292 103 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.172-201ENST00000363765 102 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RNU6-318P-201ENST00000384283 103 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 SNORA12.1-201ENST00000390873 148 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RNU6-1275P-201ENST00000391087 107 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RNU6-628P-201ENST00000410675 107 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AL353621.1-201ENST00000418219 243 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RPL23AP3-201ENST00000453844 468 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RNU6-953P-201ENST00000459154 107 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AC053481.1-201ENST00000467217 306 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 UQCRHP4-201ENST00000471686 272 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AC117440.1-201ENST00000474107 571 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 HMGN1P11-201ENST00000508668 303 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.712-201ENST00000517011 92 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 AC023632.4-201ENST00000517783 191 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 SNX18P1Y-201ENST00000616231 511 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 MAPK10-320ENST00000641462 6696 ntBASIC5.31□□□□□ -1.56
TRIM47Q96LD4 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM47Q96LD4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MFSD8-242ENST00000641690 4199 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 RNU1-83P-201ENST00000363426 164 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.570-201ENST00000384750 101 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MIR670-201ENST00000390142 98 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 RPS4XP3-201ENST00000398541 413 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 RNA5SP296-201ENST00000410523 111 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 HIGD1AP2-201ENST00000446367 280 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AC006499.6-201ENST00000511169 607 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AC107027.2-201ENST00000512197 115 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 Y_RNA.797-201ENST00000515977 94 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 SNRPGP16-201ENST00000533275 226 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AC022616.8-201ENST00000533569 253 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MIR4431-201ENST00000579990 94 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MIR3158-1-201ENST00000583596 81 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 KLKP1-201ENST00000595979 403 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 RPL23AP88-201ENST00000605759 454 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AP002826.1-201ENST00000608835 315 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AC006001.4-201ENST00000622243 395 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MIR3653-201ENST00000625572 110 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 MIR492-201ENST00000638676 116 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 DDX10P1-201ENST00000448545 1933 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 AC125257.1-201ENST00000560400 2930 ntBASIC5.3□□□□□ -1.56
TRIM47Q96LD4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
TRIM47Q96LD4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC093591.2-201ENST00000565254 3843 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AL672167.1-203ENST00000641299 2975 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNU1-130P-201ENST00000363930 160 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNU6-879P-201ENST00000364328 108 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 SNORA62.3-201ENST00000365110 153 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNA5SP366-201ENST00000365454 123 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNU6-827P-201ENST00000365553 106 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNU6-1293P-201ENST00000384077 107 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RN7SKP202-201ENST00000410439 330 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC016700.2-201ENST00000446011 156 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RN7SL98P-201ENST00000462271 300 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RPL23AP2-201ENST00000471227 466 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 PARP4P3-201ENST00000510265 317 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 NDUFA5P6-201ENST00000542110 379 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 AC090049.2-201ENST00000550377 109 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RPL23AP87-202ENST00000573039 466 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 MIR4444-1-201ENST00000581696 74 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 MIR4444-2-201ENST00000584390 74 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RNU6-156P-201ENST00000621869 107 ntBASIC5.29□□□□□ -1.56
TRIM47Q96LD4 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
TRIM47Q96LD4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms