Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC021146.4-201ENST00000309229 279 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 MIR32-201ENST00000384965 70 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 MIR329-1-201ENST00000385028 80 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RNA5SP397-201ENST00000391323 118 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-1025P-201ENST00000410629 104 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RPEP3-201ENST00000425462 676 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RPS15AP5-201ENST00000436276 388 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 MTCO1P44-201ENST00000441935 243 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RPL23AP49-201ENST00000492925 468 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC006499.6-201ENST00000511169 607 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 RNA5SP249-201ENST00000516127 99 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 IGKV2D-36-201ENST00000518643 226 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AP001328.1-201ENST00000528550 176 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC034105.4-201ENST00000568304 277 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 LARP7P3-201ENST00000579888 337 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 AC068647.2-201ENST00000637380 353 ntBASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NKX2-3Q8TAU0 NCAPGP1-201ENST00000505112 1814 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-1155P-201ENST00000363554 107 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-137P-201ENST00000363680 108 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 RNU6-968P-201ENST00000384076 107 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL160275.2-201ENST00000412010 394 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL158156.1-201ENST00000422509 473 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL391219.1-201ENST00000422570 483 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 OR2AH1P-201ENST00000425717 928 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL627311.1-201ENST00000431514 115 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL353705.4-201ENST00000449661 238 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AC015795.1-201ENST00000513669 327 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 AC022968.1-201ENST00000567372 442 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 ZYXP1-201ENST00000617638 118 ntBASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC5.53□□□□□ -1.52
NKX2-3Q8TAU0 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RNA5SP28-201ENST00000363841 119 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 SNORD73B-201ENST00000364394 72 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 Y_RNA.525-201ENST00000384570 113 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MIR10B-201ENST00000385011 110 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MT-TC-201ENST00000387405 66 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RNU2-43P-201ENST00000410306 190 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RAB9AP3-201ENST00000412737 573 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RPL7AP25-201ENST00000423357 805 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RAB9AP1-201ENST00000449393 573 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 snoU13.22-201ENST00000459428 104 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC092991.1-201ENST00000477176 376 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC023424.1-201ENST00000496058 459 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC020593.1-201ENST00000507399 299 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 HIGD1AP3-201ENST00000515857 278 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 RNU6-1095P-201ENST00000516148 108 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC084851.1-201ENST00000529105 249 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC015912.2-201ENST00000571053 181 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MIR3646-201ENST00000578301 84 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MIR4429-201ENST00000580105 73 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 AC007390.2-201ENST00000606229 3803 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 U6.95-201ENST00000636931 70 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 MIR3914-2-201ENST00000637339 95 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 GVINP1-202ENST00000531871 7271 ntBASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NKX2-3Q8TAU0 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC5.51□□□□□ -1.53
NKX2-3Q8TAU0 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms