Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCUBE3Q8IX30 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
SCUBE3Q8IX30 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCUBE3Q8IX30 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.24□□□□□ -1.57
SCUBE3Q8IX30 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCUBE3Q8IX30 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 RNA5SP87-201ENST00000384155 118 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 Y_RNA.525-201ENST00000384570 113 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 RPS16P5-201ENST00000406501 404 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 RNA5SP89-201ENST00000410300 108 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 RPS17P2-201ENST00000461663 408 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 UBE2CP3-201ENST00000502715 450 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC140172.1-201ENST00000502928 141 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 Y_RNA.712-201ENST00000517011 92 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 RNA5SP291-201ENST00000517222 105 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 U7.2-201ENST00000607576 63 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC091905.4-201ENST00000623432 202 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 AC104260.2-201ENST00000623551 3497 ntBASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SCUBE3Q8IX30 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 RNU1-32P-201ENST00000363937 159 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 SNORA8.3-201ENST00000384679 139 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 ELOCP21-201ENST00000412558 336 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 AC011753.3-201ENST00000443436 406 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 RPL30P12-201ENST00000474666 353 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 KC877373.1-201ENST00000479066 408 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 RNU6-168P-201ENST00000516189 101 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 LINC00933-203ENST00000559812 219 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 AC023043.3-201ENST00000593113 385 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 AC013791.1-201ENST00000616619 62 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 BX005214.3-202ENST00000619809 325 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 AC099654.7-201ENST00000635788 2127 ntBASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.22□□□□□ -1.57
SCUBE3Q8IX30 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
SCUBE3Q8IX30 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
SCUBE3Q8IX30 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.21□□□□□ -1.57
SCUBE3Q8IX30 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCUBE3Q8IX30 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
SCUBE3Q8IX30 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AF127577.6-201ENST00000623352 2191 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 INTS6P1-201ENST00000504674 2530 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 RN7SKP104-201ENST00000362605 328 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 RNU6-801P-201ENST00000364087 105 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 RNA5SP475-201ENST00000410568 110 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 RPL21P66-201ENST00000426566 466 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC023424.1-201ENST00000496058 459 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC016632.1-201ENST00000503994 196 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC136628.3-201ENST00000521868 290 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 TOMM20P2-201ENST00000540082 421 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 NACAP3-201ENST00000552100 481 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 CYCSP39-201ENST00000565821 309 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 MIR3646-201ENST00000578301 84 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 MIR4660-201ENST00000583549 74 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SCUBE3Q8IX30 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms