Protein–RNA interactions for Protein: Q15393

SF3B3, Splicing factor 3B subunit 3, humanhuman

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3Q15393 AL137003.2-201ENST00000606924 2538 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
SF3B3Q15393 AL355596.1-201ENST00000565399 3996 ntBASIC3.83□□□□□ -1.8
SF3B3Q15393 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SF3B3Q15393 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
SF3B3Q15393 MIR22-201ENST00000362190 85 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 RNU6-1249P-201ENST00000363237 111 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 Y_RNA.132-201ENST00000363421 102 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 DEFB109B-201ENST00000382656 264 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 SNORD116-29-201ENST00000384516 83 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SF3B3Q15393 SNORD67-201ENST00000390833 111 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AL583834.1-201ENST00000406943 343 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 MIR548K-201ENST00000408406 116 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 RNU6-712P-201ENST00000410558 100 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.82□□□□□ -1.8
SF3B3Q15393 RPS3AP52-201ENST00000435639 297 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 GTF2IP13-201ENST00000438487 386 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AC004801.2-202ENST00000463559 283 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 RPS29P26-201ENST00000477483 171 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 RPL21P93-201ENST00000480465 489 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 RBBP4P6-201ENST00000508098 202 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.82□□□□□ -1.8
SF3B3Q15393 RNU6-1088P-201ENST00000516850 104 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.82□□□□□ -1.8
SF3B3Q15393 AP000889.2-201ENST00000532684 490 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.82□□□□□ -1.8
SF3B3Q15393 MIR4672-201ENST00000583126 81 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.82□□□□□ -1.8
SF3B3Q15393 AL450472.3-201ENST00000615578 367 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.82□□□□□ -1.8
SF3B3Q15393 AC134503.1-201ENST00000633048 54 ntBASIC3.82□□□□□ -1.8
SF3B3Q15393 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SF3B3Q15393 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SF3B3Q15393 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B3Q15393 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.81□□□□□ -1.8
SF3B3Q15393 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B3Q15393 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B3Q15393 SNORD42.2-201ENST00000365570 69 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B3Q15393 RNU6-43P-201ENST00000384302 107 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 RNU6-1127P-201ENST00000384580 107 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SF3B3Q15393 Y_RNA.579-201ENST00000390939 94 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 RNU4-14P-201ENST00000410858 122 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 VN1R36P-201ENST00000414936 291 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 CALM2P2-201ENST00000428512 440 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B3Q15393 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B3Q15393 HIGD1AP11-201ENST00000438361 280 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 RPL21P8-201ENST00000465083 535 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AC010285.1-201ENST00000470580 392 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 RNU6-559P-201ENST00000516151 98 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 Y_RNA.682-201ENST00000516457 100 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 NDUFB9P3-201ENST00000521269 501 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 IGHV3-76-201ENST00000522465 295 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.81□□□□□ -1.8
SF3B3Q15393 APOOP1-201ENST00000604695 592 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.81□□□□□ -1.8
SF3B3Q15393 AL133215.3-201ENST00000609801 448 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
SF3B3Q15393 AC090971.5-201ENST00000621102 293 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AL589994.2-201ENST00000621124 579 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AC091903.1-201ENST00000624322 454 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 AC073476.4-201ENST00000628409 72 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SF3B3Q15393 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B3Q15393 AC002546.1-201ENST00000588041 2504 ntBASIC3.81□□□□□ -1.8
SF3B3Q15393 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B3Q15393 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.81□□□□□ -1.8
SF3B3Q15393 AC010733.2-201ENST00000589496 5702 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.8□□□□□ -1.8
SF3B3Q15393 FAM35BP-202ENST00000497389 3337 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 SNORD113-7-201ENST00000363762 77 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 RNU6-701P-201ENST00000384059 107 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 RNU6-1297P-201ENST00000384415 104 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC110754.1-201ENST00000399740 601 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 RNU6-55P-201ENST00000411092 107 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 RNU6-954P-201ENST00000411355 107 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 POLHP1-201ENST00000411806 470 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 EEF1A1P41-201ENST00000414667 207 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 SSXP9-201ENST00000417503 292 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC099677.1-201ENST00000420575 175 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC090774.1-201ENST00000435925 246 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC004866.2-201ENST00000438285 481 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.8□□□□□ -1.8
SF3B3Q15393 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.8□□□□□ -1.8
SF3B3Q15393 RPS15AP27-201ENST00000449183 343 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 Y_RNA.639-201ENST00000458981 102 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 SCARNA18-201ENST00000459004 134 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 Y_RNA.635-201ENST00000459041 101 ntBASIC3.8□□□□□ -1.8
SF3B3Q15393 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms