Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.13□□□□□ -2.07
CCNA1P78396 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CCNA1P78396 AP000776.1-201ENST00000530032 1663 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC138393.1-203ENST00000327086 343 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU4-92P-201ENST00000363783 136 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 MIR19A-201ENST00000384878 82 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 MIR561-201ENST00000385216 97 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU2-20P-201ENST00000410425 191 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AL160275.3-201ENST00000423876 471 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC004854.1-201ENST00000440356 349 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 BRK1P2-201ENST00000442875 223 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC092001.1-201ENST00000453012 261 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 PMCHL2-203ENST00000457791 237 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC093281.2-201ENST00000510153 597 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 MTCYBP43-201ENST00000513621 740 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 SNORA31.3-201ENST00000516029 96 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU1-40P-201ENST00000516816 164 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU1-97P-201ENST00000516872 164 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU6-1183P-201ENST00000517054 60 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC012213.3-201ENST00000577199 777 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 MIR4782-201ENST00000577987 79 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.13□□□□□ -2.07
CCNA1P78396 AC008749.1-201ENST00000597650 306 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AL158042.1-201ENST00000605338 460 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 RNU6-91P-201ENST00000607774 107 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC008121.3-201ENST00000618726 433 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 AC103710.2-202ENST00000641454 2853 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.13□□□□□ -2.07
CCNA1P78396 CDC27P3-201ENST00000635418 1910 ntBASIC2.13□□□□□ -2.07
CCNA1P78396 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
CCNA1P78396 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCNA1P78396 CENPCP1-201ENST00000533085 2578 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 RNU6-1280P-201ENST00000365211 107 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 MIR9-3-201ENST00000385084 90 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 SNORA17.3-201ENST00000391159 129 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AL627390.1-201ENST00000396055 340 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 HMGB3P2-201ENST00000411913 584 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 ELOCP9-201ENST00000418624 239 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNA1P78396 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNA1P78396 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.12□□□□□ -2.07
CCNA1P78396 MTND3P1-201ENST00000441336 220 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNA1P78396 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
CCNA1P78396 AL021397.1-201ENST00000451806 248 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.12□□□□□ -2.07
CCNA1P78396 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNA1P78396 SNORD13-201ENST00000459299 104 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 RPL7P18-201ENST00000478965 734 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC2.12□□□□□ -2.07
CCNA1P78396 RPF2P2-201ENST00000504693 896 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.12□□□□□ -2.07
CCNA1P78396 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.12□□□□□ -2.07
CCNA1P78396 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC079598.5-201ENST00000547460 117 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 MIR6134-201ENST00000617606 109 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC013470.4-201ENST00000619978 986 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CCNA1P78396 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CCNA1P78396 AC106754.1-201ENST00000562632 1513 ntBASIC2.12□□□□□ -2.07
CCNA1P78396 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.11□□□□□ -2.07
CCNA1P78396 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.11□□□□□ -2.07
CCNA1P78396 RNU6-462P-201ENST00000362659 105 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 SNORA4.1-201ENST00000364263 144 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CCNA1P78396 FGF7P8-201ENST00000402994 292 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AL139397.2-201ENST00000404529 772 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 HSFY7P-201ENST00000432672 318 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 HSFY8P-201ENST00000437934 318 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AL353689.1-201ENST00000438895 199 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.11□□□□□ -2.07
CCNA1P78396 MTCO1P27-201ENST00000448269 226 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 HSFY5P-201ENST00000453726 309 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 RNU6-581P-201ENST00000516214 105 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CCNA1P78396 AC007375.1-201ENST00000554513 578 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 PSMA3P-201ENST00000555485 635 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.11□□□□□ -2.07
CCNA1P78396 AL596327.1-201ENST00000603629 213 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AC087045.1-201ENST00000605856 382 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AC009974.1-201ENST00000608881 455 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 AC017037.3-201ENST00000625016 472 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 MTND5P33-201ENST00000571250 1450 ntBASIC2.11□□□□□ -2.07
CCNA1P78396 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CCNA1P78396 RNU5E-1-201ENST00000362477 120 ntBASIC2.1□□□□□ -2.07
CCNA1P78396 RNU6-457P-201ENST00000363999 107 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms