Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CD44P16070 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CD44P16070 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
CD44P16070 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 DEFB108F-201ENST00000344638 222 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNU6-170P-201ENST00000362832 104 ntBASIC6.04□□□□□ -1.44
CD44P16070 SNORA1-201ENST00000384107 130 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNU6-816P-201ENST00000390914 107 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNU6-1268P-201ENST00000391214 107 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNU6-1239P-201ENST00000391310 107 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNA5SP241-201ENST00000391326 114 ntBASIC6.04□□□□□ -1.44
CD44P16070 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.04□□□□□ -1.44
CD44P16070 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC6.04□□□□□ -1.44
CD44P16070 AC083906.5-201ENST00000503722 328 ntBASIC6.04□□□□□ -1.44
CD44P16070 RNU6-126P-201ENST00000516685 103 ntBASIC6.04□□□□□ -1.44
CD44P16070 AC109329.2-201ENST00000519658 482 ntBASIC6.04□□□□□ -1.44
CD44P16070 IGHVIII-67-2-201ENST00000519849 88 ntBASIC6.04□□□□□ -1.44
CD44P16070 AL138895.2-201ENST00000603019 178 ntBASIC6.04□□□□□ -1.44
CD44P16070 AC244107.2-201ENST00000611773 76 ntBASIC6.04□□□□□ -1.44
CD44P16070 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CD44P16070 FAS-AS1.2-201ENST00000620386 170 ntBASIC6.04□□□□□ -1.44
CD44P16070 AC002064.3-201ENST00000623448 346 ntBASIC6.04□□□□□ -1.44
CD44P16070 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.04□□□□□ -1.44
CD44P16070 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CD44P16070 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 MAPK10-328ENST00000641553 4009 ntBASIC6.03□□□□□ -1.44
CD44P16070 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 AC004656.1-201ENST00000568479 4951 ntBASIC6.03□□□□□ -1.44
CD44P16070 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.03□□□□□ -1.44
CD44P16070 BCORP1-203ENST00000513194 5093 ntBASIC6.03□□□□□ -1.44
CD44P16070 AL159152.1-201ENST00000635019 2587 ntBASIC6.03□□□□□ -1.44
CD44P16070 RNU1-100P-201ENST00000365255 165 ntBASIC6.03□□□□□ -1.44
CD44P16070 RNU6-1292P-201ENST00000383856 107 ntBASIC6.03□□□□□ -1.44
CD44P16070 RNU6-409P-201ENST00000384114 104 ntBASIC6.03□□□□□ -1.44
CD44P16070 RNU6-987P-201ENST00000384759 104 ntBASIC6.03□□□□□ -1.44
CD44P16070 RPS3AP2-201ENST00000407190 754 ntBASIC6.03□□□□□ -1.44
CD44P16070 Y_RNA.611-201ENST00000410682 108 ntBASIC6.03□□□□□ -1.44
CD44P16070 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC6.03□□□□□ -1.44
CD44P16070 AC023449.1-201ENST00000454464 154 ntBASIC6.03□□□□□ -1.44
CD44P16070 AC107626.1-201ENST00000471084 183 ntBASIC6.03□□□□□ -1.44
CD44P16070 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 RNA5SP291-201ENST00000517222 105 ntBASIC6.03□□□□□ -1.44
CD44P16070 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.03□□□□□ -1.44
CD44P16070 AC107958.1-201ENST00000556576 290 ntBASIC6.03□□□□□ -1.44
CD44P16070 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CD44P16070 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
CD44P16070 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CD44P16070 OR13C1P-202ENST00000641378 2919 ntBASIC6.02□□□□□ -1.45
CD44P16070 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CD44P16070 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CD44P16070 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.02□□□□□ -1.45
CD44P16070 U3.8-201ENST00000363675 217 ntBASIC6.02□□□□□ -1.45
CD44P16070 SNORA51.8-201ENST00000384234 132 ntBASIC6.02□□□□□ -1.45
CD44P16070 RNU6-837P-201ENST00000391056 108 ntBASIC6.02□□□□□ -1.45
CD44P16070 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.02□□□□□ -1.45
CD44P16070 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC6.02□□□□□ -1.45
CD44P16070 RPL7AP49-201ENST00000429522 581 ntBASIC6.02□□□□□ -1.45
CD44P16070 AL591438.1-201ENST00000433508 581 ntBASIC6.02□□□□□ -1.45
CD44P16070 EEF1B2P6-201ENST00000445713 673 ntBASIC6.02□□□□□ -1.45
CD44P16070 RN7SL72P-201ENST00000460697 269 ntBASIC6.02□□□□□ -1.45
CD44P16070 APOA2-205ENST00000468465 421 ntTSL 2 BASIC6.02□□□□□ -1.45
CD44P16070 RNU6-1006P-201ENST00000516998 103 ntBASIC6.02□□□□□ -1.45
CD44P16070 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 MIR4668-201ENST00000582284 70 ntBASIC6.02□□□□□ -1.45
CD44P16070 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CD44P16070 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.02□□□□□ -1.45
CD44P16070 uc_338.7-201ENST00000621834 124 ntBASIC6.02□□□□□ -1.45
CD44P16070 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 LINC01963-201ENST00000562038 3148 ntBASIC6.02□□□□□ -1.45
CD44P16070 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.02□□□□□ -1.45
CD44P16070 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CD44P16070 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
CD44P16070 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.01□□□□□ -1.45
CD44P16070 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.01□□□□□ -1.45
CD44P16070 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.01□□□□□ -1.45
CD44P16070 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
CD44P16070 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CD44P16070 RNU1-75P-201ENST00000347264 129 ntBASIC6.01□□□□□ -1.45
CD44P16070 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.01□□□□□ -1.45
CD44P16070 RNU6-486P-201ENST00000363116 107 ntBASIC6.01□□□□□ -1.45
CD44P16070 RNY1P6-201ENST00000384193 109 ntBASIC6.01□□□□□ -1.45
CD44P16070 MIR873-201ENST00000401120 77 ntBASIC6.01□□□□□ -1.45
CD44P16070 Y_RNA.607-201ENST00000410597 98 ntBASIC6.01□□□□□ -1.45
CD44P16070 MRPL35P3-201ENST00000421557 364 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 138.7 ms