Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 RNU6-323P-201ENST00000521915 107 ntBASIC3.57□□□□□ -1.84
VPS4BO75351 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
VPS4BO75351 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.57□□□□□ -1.84
VPS4BO75351 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS4BO75351 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.57□□□□□ -1.84
VPS4BO75351 AL163153.1-201ENST00000554223 283 ntBASIC3.57□□□□□ -1.84
VPS4BO75351 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
VPS4BO75351 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS4BO75351 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.57□□□□□ -1.84
VPS4BO75351 AL355365.1-201ENST00000616480 294 ntBASIC3.57□□□□□ -1.84
VPS4BO75351 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS4BO75351 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.57□□□□□ -1.84
VPS4BO75351 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
VPS4BO75351 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS4BO75351 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS4BO75351 RNU6-593P-201ENST00000364716 112 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 SNORD42.2-201ENST00000365570 69 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RNY4P36-201ENST00000391116 96 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RNU6-1197P-201ENST00000391183 107 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 MTCYBP4-201ENST00000401524 249 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 MTCO2P27-201ENST00000420740 428 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AP000907.1-201ENST00000428428 510 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 NDUFB4P6-201ENST00000436819 366 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 PIGFP3-201ENST00000441918 722 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS4BO75351 Y_RNA.639-201ENST00000458981 102 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RN7SL330P-201ENST00000469709 307 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 KC877373.1-201ENST00000479066 408 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RPL21P13-201ENST00000488305 481 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 HMGB1P30-201ENST00000492455 606 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RPL30P5-201ENST00000494923 336 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RNA5SP291-201ENST00000517222 105 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS4BO75351 APOOP3-201ENST00000536787 586 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS4BO75351 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.56□□□□□ -1.84
VPS4BO75351 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS4BO75351 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.56□□□□□ -1.84
VPS4BO75351 XIST_intron.1-201ENST00000619444 68 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AP000553.6-201ENST00000641242 118 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS4BO75351 AC090740.1-201ENST00000623193 2262 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 AC058791.1-201ENST00000608412 3198 ntBASIC3.56□□□□□ -1.84
VPS4BO75351 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS4BO75351 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
VPS4BO75351 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
VPS4BO75351 AC118273.1-201ENST00000525324 3006 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS4BO75351 TNPO1P3-201ENST00000436471 2662 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 MIR412-201ENST00000362142 91 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNA5SP42-201ENST00000364278 115 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-43P-201ENST00000384302 107 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-1179P-201ENST00000384667 107 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-1025P-201ENST00000410629 104 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 AL158071.1-201ENST00000430315 461 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS4BO75351 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RPL21P104-201ENST00000464143 478 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RPS29P2-201ENST00000479278 136 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AC026801.1-201ENST00000497178 464 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-1332P-201ENST00000516666 104 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-1282P-201ENST00000516735 96 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 RNU6-579P-201ENST00000516879 102 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AC069113.1-201ENST00000517763 267 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS4BO75351 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS4BO75351 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 TGIF1P1-201ENST00000558095 802 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AC093249.1-201ENST00000567049 203 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS4BO75351 AC007938.3-201ENST00000604965 623 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 AL110115.1-201ENST00000614396 364 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 MTND4LP32-201ENST00000636111 270 ntBASIC3.55□□□□□ -1.84
VPS4BO75351 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS4BO75351 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS4BO75351 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS4BO75351 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS4BO75351 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS4BO75351 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS4BO75351 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 Y_RNA.138-201ENST00000363462 102 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 RNU6-384P-201ENST00000364900 104 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 DEFB109C-201ENST00000382575 264 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 DEFB109B-201ENST00000382656 264 ntBASIC3.54□□□□□ -1.84
VPS4BO75351 RNU6-95P-201ENST00000384697 107 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms