Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNU6-383P-201ENST00000410864 94 ntBASIC3.78□□□□□ -1.8
PAX4O43316 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 RPL17P36-201ENST00000420302 549 ntBASIC3.78□□□□□ -1.8
PAX4O43316 HMGB1P27-201ENST00000431429 603 ntBASIC3.78□□□□□ -1.8
PAX4O43316 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 AC090774.1-201ENST00000435925 246 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AL353689.1-201ENST00000438895 199 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AL391987.1-201ENST00000441025 200 ntBASIC3.78□□□□□ -1.8
PAX4O43316 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 RN7SL189P-201ENST00000468631 289 ntBASIC3.78□□□□□ -1.8
PAX4O43316 RN7SL585P-201ENST00000470538 280 ntBASIC3.78□□□□□ -1.8
PAX4O43316 COX6B1P2-201ENST00000489624 230 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AC104164.2-201ENST00000496953 495 ntBASIC3.78□□□□□ -1.8
PAX4O43316 SCARNA20.4-201ENST00000516969 131 ntBASIC3.78□□□□□ -1.8
PAX4O43316 IGKV2D-36-201ENST00000518643 226 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AP004607.2-201ENST00000533949 322 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 AL355816.1-201ENST00000607951 118 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AC244107.2-201ENST00000611773 76 ntBASIC3.78□□□□□ -1.8
PAX4O43316 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.78□□□□□ -1.8
PAX4O43316 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.78□□□□□ -1.8
PAX4O43316 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 AC100757.1-201ENST00000616872 1835 ntBASIC3.78□□□□□ -1.8
PAX4O43316 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
PAX4O43316 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC3.78□□□□□ -1.8
PAX4O43316 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PAX4O43316 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
PAX4O43316 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.78□□□□□ -1.81
PAX4O43316 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 LCMT1-AS2-202ENST00000565214 5666 ntBASIC3.77□□□□□ -1.81
PAX4O43316 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
PAX4O43316 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.77□□□□□ -1.81
PAX4O43316 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.77□□□□□ -1.81
PAX4O43316 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.77□□□□□ -1.81
PAX4O43316 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.77□□□□□ -1.81
PAX4O43316 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC3.77□□□□□ -1.81
PAX4O43316 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 RNU6-873P-201ENST00000363833 107 ntBASIC3.77□□□□□ -1.81
PAX4O43316 SNORD45.3-201ENST00000363836 72 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RNVU1-3-201ENST00000364313 161 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RNU6-776P-201ENST00000364403 104 ntBASIC3.77□□□□□ -1.81
PAX4O43316 Y_RNA.287-201ENST00000364853 94 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RNU6-1022P-201ENST00000365049 104 ntBASIC3.77□□□□□ -1.81
PAX4O43316 MIR549A-201ENST00000385268 96 ntBASIC3.77□□□□□ -1.81
PAX4O43316 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PAX4O43316 RNU1-77P-201ENST00000390868 162 ntBASIC3.77□□□□□ -1.81
PAX4O43316 U3.19-201ENST00000390893 196 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RNU6-1248P-201ENST00000391096 64 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC005522.1-201ENST00000395416 346 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC009804.1-201ENST00000400949 179 ntBASIC3.77□□□□□ -1.81
PAX4O43316 MIR889-201ENST00000401280 79 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AL031736.2-201ENST00000426573 787 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.77□□□□□ -1.81
PAX4O43316 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.77□□□□□ -1.81
PAX4O43316 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.77□□□□□ -1.81
PAX4O43316 snoU109.2-201ENST00000459316 135 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC107297.1-201ENST00000459991 176 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RPL21P6-201ENST00000479171 504 ntBASIC3.77□□□□□ -1.81
PAX4O43316 RPL23AP70-201ENST00000483361 460 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC3.77□□□□□ -1.81
PAX4O43316 IGKV3D-34-201ENST00000522638 302 ntBASIC3.77□□□□□ -1.81
PAX4O43316 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.77□□□□□ -1.81
PAX4O43316 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.77□□□□□ -1.81
PAX4O43316 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.77□□□□□ -1.81
PAX4O43316 AC108738.1-201ENST00000603703 237 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC131238.1-201ENST00000617135 328 ntBASIC3.77□□□□□ -1.81
PAX4O43316 MIR6837-201ENST00000620884 64 ntBASIC3.77□□□□□ -1.81
PAX4O43316 MIR4275-201ENST00000636486 87 ntBASIC3.77□□□□□ -1.81
PAX4O43316 AC241585.2-209ENST00000638217 143 ntBASIC3.77□□□□□ -1.81
PAX4O43316 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
PAX4O43316 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.77□□□□□ -1.81
PAX4O43316 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
PAX4O43316 LARS-201ENST00000274562 2213 ntTSL 2 BASIC3.76□□□□□ -1.81
PAX4O43316 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAX4O43316 AC000123.3-201ENST00000624029 4975 ntBASIC3.76□□□□□ -1.81
PAX4O43316 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
PAX4O43316 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
PAX4O43316 AL450345.1-202ENST00000605741 3881 ntBASIC3.76□□□□□ -1.81
PAX4O43316 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
PAX4O43316 AC079741.1-201ENST00000321498 212 ntBASIC3.76□□□□□ -1.81
PAX4O43316 MIR133B-201ENST00000362210 119 ntBASIC3.76□□□□□ -1.81
PAX4O43316 RNA5SP335-201ENST00000363817 110 ntBASIC3.76□□□□□ -1.81
PAX4O43316 MIR526A2-201ENST00000390198 65 ntBASIC3.76□□□□□ -1.81
PAX4O43316 AL355497.1-201ENST00000406262 551 ntBASIC3.76□□□□□ -1.81
PAX4O43316 U3.40-201ENST00000408706 208 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms