Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 TATDN2P3-201ENST00000452855 3665 ntBASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 UBR1-202ENST00000546274 3332 ntTSL 2 BASIC1.37□□□□□ -2.19
KRTAP4-4Q9BYR3 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC004158.1-201ENST00000564508 4319 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MAPK10-266ENST00000641066 6555 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AL021368.2-201ENST00000606125 5352 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AL161431.1-201ENST00000618966 4205 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 SPRR2C-201ENST00000290702 219 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RPL10P16-201ENST00000325000 645 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 Y_RNA.239-201ENST00000364444 113 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5SP396-201ENST00000364834 120 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNA5-8SP5-201ENST00000365304 152 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA18.2-201ENST00000383865 132 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNVU1-15-201ENST00000384476 165 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 SNORA70I-201ENST00000384544 135 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-243P-201ENST00000391140 107 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RNU6-1254P-201ENST00000391266 104 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AL138878.1-201ENST00000405131 347 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SKP137-201ENST00000411074 307 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 GPS2P1-201ENST00000411761 986 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PPIAP23-201ENST00000420099 497 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PPIAP32-201ENST00000449940 472 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RPS3P1-201ENST00000456781 192 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC008620.1-201ENST00000468453 592 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL36P-201ENST00000469345 276 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 RN7SL228P-201ENST00000470060 303 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 PPIAP15-201ENST00000479662 484 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC079944.1-201ENST00000485426 495 ntBASIC1.36□□□□□ -2.19
KRTAP4-4Q9BYR3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms