Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 RNU6-428P-201ENST00000362942 107 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 SNORD115-32-201ENST00000364079 82 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 U8.6-201ENST00000364939 135 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 SNORA40.5-201ENST00000391061 128 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 RPEP3-201ENST00000425462 676 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AC005154.2-201ENST00000438110 379 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AC005042.3-201ENST00000453230 174 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 RPS29P24-201ENST00000486345 171 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 RNU6-966P-201ENST00000516479 104 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 RNU2-56P-201ENST00000516826 190 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AL391261.3-201ENST00000557194 520 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 MIR4472-2-201ENST00000582069 67 ntBASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CNTNAP3BQ96NU0 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CNTNAP3BQ96NU0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CNTNAP3BQ96NU0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.64
CNTNAP3BQ96NU0 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 MTND5P35-201ENST00000557537 1720 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AL590240.1-201ENST00000334118 313 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AL160275.2-201ENST00000412010 394 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 BX510359.2-201ENST00000417920 305 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 OR2AH1P-201ENST00000425717 928 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 IFNWP4-201ENST00000453148 294 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 RN7SKP164-201ENST00000516138 266 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 Y_RNA.677-201ENST00000516401 85 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 SNORA74D-201ENST00000516404 141 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 RNA5SP43-201ENST00000516559 110 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 MIR4458-201ENST00000578872 75 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC005176.2-201ENST00000596933 147 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC108081.1-201ENST00000604358 221 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AP002826.1-201ENST00000608835 315 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AC068831.7-201ENST00000616954 363 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AL354798.1-201ENST00000622505 329 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 AL592437.2-201ENST00000421655 2434 ntBASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CNTNAP3BQ96NU0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC083899.1-201ENST00000454465 3819 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-103P-201ENST00000363686 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-968P-201ENST00000384076 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 RNU6-1145P-201ENST00000384246 107 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 RPS26P8-201ENST00000393490 348 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 Y_RNA.651-201ENST00000459380 103 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 Y_RNA.637-201ENST00000459424 114 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 ENPP7P9-201ENST00000514456 627 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC107016.1-201ENST00000550463 337 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 HMGB1P14-201ENST00000557424 591 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 MIR3145-201ENST00000580727 82 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC012468.1-201ENST00000604888 430 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 U6.95-201ENST00000636931 70 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 AC104260.2-201ENST00000623551 3497 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 ASNSP1-201ENST00000518311 1939 ntBASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.82□□□□□ -1.64
CNTNAP3BQ96NU0 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CNTNAP3BQ96NU0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms