Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AL355598.1-201ENST00000604169 202 ntBASIC4.73□□□□□ -1.65
LMNB1P20700 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.73□□□□□ -1.65
LMNB1P20700 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.73□□□□□ -1.65
LMNB1P20700 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LMNB1P20700 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.72□□□□□ -1.65
LMNB1P20700 SDAD1P2-201ENST00000441308 2028 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 AL030996.1-201ENST00000411430 235 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 RPL23AP50-201ENST00000434149 455 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 CHEK2P4-201ENST00000450340 246 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 RPL9P32-201ENST00000464118 620 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 RPS23P3-201ENST00000470993 430 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.72□□□□□ -1.65
LMNB1P20700 RPS15AP34-201ENST00000487776 387 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC015911.1-201ENST00000495111 156 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC110794.1-201ENST00000505816 425 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC105758.1-201ENST00000506038 399 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC4.72□□□□□ -1.65
LMNB1P20700 TRAV37-201ENST00000553906 342 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.72□□□□□ -1.65
LMNB1P20700 AL157871.3-201ENST00000557231 293 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AC002545.1-201ENST00000592511 181 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 MIR8058-201ENST00000615737 89 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 RMST_4.1-201ENST00000616886 107 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 U4.1-201ENST00000620349 87 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 AL360181.4-201ENST00000621752 134 ntBASIC4.72□□□□□ -1.65
LMNB1P20700 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.72□□□□□ -1.65
LMNB1P20700 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
LMNB1P20700 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LMNB1P20700 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
LMNB1P20700 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LMNB1P20700 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
LMNB1P20700 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
LMNB1P20700 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.71□□□□□ -1.66
LMNB1P20700 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 Y_RNA.48-201ENST00000362710 103 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 RNU6-335P-201ENST00000364563 113 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 RNU6-384P-201ENST00000364900 104 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 RNA5SP120-201ENST00000410900 112 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 AC093151.1-201ENST00000427711 313 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.71□□□□□ -1.66
LMNB1P20700 AL353752.1-201ENST00000454946 260 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 PCMTD1P1-201ENST00000455560 355 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 AC068781.1-201ENST00000488231 618 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 MLLT10P2-201ENST00000506434 249 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 RNU6-635P-201ENST00000516651 102 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 AC084851.1-201ENST00000529105 249 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 MIR1273C-201ENST00000578669 77 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 SNRPGP15-201ENST00000600149 222 ntBASIC4.71□□□□□ -1.66
LMNB1P20700 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
LMNB1P20700 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
LMNB1P20700 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LMNB1P20700 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.7□□□□□ -1.66
LMNB1P20700 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMNB1P20700 AC066616.2-201ENST00000559334 1481 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 Y_RNA.574-201ENST00000384766 95 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 RNU6-174P-201ENST00000410406 106 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 RNU6-325P-201ENST00000411132 105 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 Z85995.1-201ENST00000415547 335 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC011816.1-201ENST00000441346 546 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.7□□□□□ -1.66
LMNB1P20700 SNORD105B-201ENST00000458770 79 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC008571.1-201ENST00000467232 300 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC010655.3-201ENST00000478818 450 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC011005.2-201ENST00000487324 359 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.7□□□□□ -1.66
LMNB1P20700 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.7□□□□□ -1.66
LMNB1P20700 RNA5SP164-201ENST00000516533 110 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.7□□□□□ -1.66
LMNB1P20700 GNAI2P1-201ENST00000541815 315 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 TRAV32-201ENST00000553993 340 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 HMGB1P14-201ENST00000557424 591 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 MED28P6-201ENST00000558776 231 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.7□□□□□ -1.66
LMNB1P20700 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LMNB1P20700 SNORD84-203ENST00000584275 78 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC005899.2-201ENST00000584353 90 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AL121917.1-203ENST00000605534 577 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.7□□□□□ -1.66
LMNB1P20700 RNU1-30P-201ENST00000606575 163 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.7□□□□□ -1.66
LMNB1P20700 MIR7702-201ENST00000621931 59 ntBASIC4.7□□□□□ -1.66
LMNB1P20700 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.7□□□□□ -1.66
LMNB1P20700 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
LMNB1P20700 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.7□□□□□ -1.66
LMNB1P20700 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LMNB1P20700 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LMNB1P20700 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.69□□□□□ -1.66
LMNB1P20700 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms