Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 RNA5SP397-201ENST00000391323 118 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 RN7SKP267-201ENST00000410381 285 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 AL451074.5-201ENST00000415894 435 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 SETP5-201ENST00000437270 562 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.79□□□□□ -1.48
SEMA3EO15041 AC009220.1-201ENST00000451614 275 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 AC005042.3-201ENST00000453230 174 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.79□□□□□ -1.48
SEMA3EO15041 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.79□□□□□ -1.48
SEMA3EO15041 RN7SKP122-201ENST00000515923 296 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.79□□□□□ -1.48
SEMA3EO15041 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC5.79□□□□□ -1.48
SEMA3EO15041 AC108706.1-201ENST00000611053 297 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC5.79□□□□□ -1.48
SEMA3EO15041 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEMA3EO15041 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC5.79□□□□□ -1.48
SEMA3EO15041 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC5.79□□□□□ -1.48
SEMA3EO15041 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.79□□□□□ -1.48
SEMA3EO15041 MUC2-202ENST00000613187 4845 ntBASIC5.79□□□□□ -1.48
SEMA3EO15041 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.79□□□□□ -1.48
SEMA3EO15041 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SEMA3EO15041 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEMA3EO15041 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SEMA3EO15041 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC5.78□□□□□ -1.48
SEMA3EO15041 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SEMA3EO15041 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEMA3EO15041 SNORD113.2-201ENST00000364166 89 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 RNU6-213P-201ENST00000384051 104 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 MIR141-201ENST00000384975 95 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 MIR607-201ENST00000385241 96 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 SNORA40.19-201ENST00000390846 128 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 RNA5SP332-201ENST00000391063 115 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.78□□□□□ -1.48
SEMA3EO15041 AC068287.1-201ENST00000430283 295 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 RN7SL459P-201ENST00000481078 302 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 RN7SL346P-201ENST00000491561 294 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 AC078817.1-201ENST00000492623 435 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.78□□□□□ -1.48
SEMA3EO15041 AC105129.1-201ENST00000560250 297 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 HSPE1P5-201ENST00000561489 272 ntBASIC5.78□□□□□ -1.48
SEMA3EO15041 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.78□□□□□ -1.48
SEMA3EO15041 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.78□□□□□ -1.48
SEMA3EO15041 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SEMA3EO15041 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
SEMA3EO15041 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
SEMA3EO15041 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SEMA3EO15041 OR56B2P-202ENST00000641377 2453 ntBASIC5.77□□□□□ -1.48
SEMA3EO15041 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SEMA3EO15041 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEMA3EO15041 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEMA3EO15041 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEMA3EO15041 RN7SKP51-201ENST00000410781 304 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC016397.1-201ENST00000412463 242 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 RPS26P42-201ENST00000413485 326 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC140479.3-201ENST00000418944 1126 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 BTF3P6-201ENST00000448054 499 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC012308.1-201ENST00000451232 178 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 RN7SL354P-201ENST00000469282 294 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.77□□□□□ -1.49
SEMA3EO15041 Vault.1-201ENST00000516474 102 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 RAB9BP1-201ENST00000519581 626 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 CKS1BP7-201ENST00000522230 235 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC093249.4-201ENST00000564755 259 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC209154.1-201ENST00000582156 337 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AL078605.1-201ENST00000603529 500 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC022441.3-201ENST00000605737 136 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC010999.1-201ENST00000611856 324 ntBASIC5.77□□□□□ -1.49
SEMA3EO15041 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.77□□□□□ -1.49
SEMA3EO15041 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
SEMA3EO15041 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SEMA3EO15041 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SEMA3EO15041 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SEMA3EO15041 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SEMA3EO15041 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.76□□□□□ -1.49
SEMA3EO15041 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.76□□□□□ -1.49
SEMA3EO15041 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 Y_RNA.262-201ENST00000364641 102 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 RNU6-81P-201ENST00000365608 104 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 RPL23AP26-201ENST00000412728 464 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 DNAJC19P7-201ENST00000428811 344 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 UQCRBP2-201ENST00000447827 297 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 MRPS10P1-201ENST00000448483 130 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 SNRPGP7-201ENST00000469016 106 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.76□□□□□ -1.49
SEMA3EO15041 AC074133.1-201ENST00000515696 183 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 RPL21P9-201ENST00000556149 474 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 AC233702.2-202ENST00000562547 291 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 KLKP1-201ENST00000595979 403 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 BPIFA4P-203ENST00000603168 689 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 MIR3529-201ENST00000637713 78 ntBASIC5.76□□□□□ -1.49
SEMA3EO15041 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SEMA3EO15041 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms