Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RNU1-61P-201ENST00000516107 151 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 SCARNA16.2-201ENST00000516520 172 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC131281.1-201ENST00000522984 164 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 YPEL5P3-201ENST00000547227 352 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC090115.3-201ENST00000553218 849 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 MIR8058-201ENST00000615737 89 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AC141273.2-201ENST00000618989 130 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
CD248Q9HCU0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.1□□□□□ -1.75
CD248Q9HCU0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 AC005183.1-201ENST00000603687 1979 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 Y_RNA.39-201ENST00000362620 98 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 Y_RNA.210-201ENST00000364161 110 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 SNORA73.2-201ENST00000364946 201 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 SNORD70.1-201ENST00000391007 85 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 Z99755.1-201ENST00000414048 380 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RPLP0P7-201ENST00000416050 667 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 HMGB1P9-201ENST00000429856 646 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RPL23AP50-201ENST00000434149 455 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 NOTCH2P1-201ENST00000443481 624 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RN7SL330P-201ENST00000469709 307 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 COX7A2P2-201ENST00000505291 250 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 SNORA14.1-201ENST00000516113 141 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RNU6-1069P-201ENST00000516612 133 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RNU6-1332P-201ENST00000516666 104 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RNU6-307P-201ENST00000516743 106 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 RN7SKP289-201ENST00000517244 295 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 AC022616.4-201ENST00000522985 181 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 AC023157.2-201ENST00000540596 141 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.09□□□□□ -1.75
CD248Q9HCU0 AC120057.2-201ENST00000571520 271 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 AC015967.1-201ENST00000619893 476 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 CR392039.5-201ENST00000623201 510 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 AL606534.2-204ENST00000635008 178 ntBASIC4.09□□□□□ -1.75
CD248Q9HCU0 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CD248Q9HCU0 MTND5P7-201ENST00000413558 1798 ntBASIC4.09□□□□□ -1.76
CD248Q9HCU0 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CD248Q9HCU0 Y_RNA.2-201ENST00000362330 96 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 SNORA60-201ENST00000362396 134 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU6-1078P-201ENST00000364522 103 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 Y_RNA.350-201ENST00000365409 98 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU6-339P-201ENST00000384310 107 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RAB9AP3-201ENST00000412737 573 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 PGBD4P6-201ENST00000421501 610 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RPL21P109-201ENST00000422213 475 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC093106.2-201ENST00000428212 385 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RPL23AP69-201ENST00000431134 458 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 EZH2P1-201ENST00000431167 291 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC005094.1-201ENST00000440420 368 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RAB9AP1-201ENST00000449393 573 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 AL136097.1-201ENST00000456945 913 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC110792.1-201ENST00000491826 472 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC009901.1-201ENST00000506703 541 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RBBP4P6-201ENST00000508098 202 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU6-406P-201ENST00000516470 107 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNA5SP384-201ENST00000516615 116 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU4-77P-201ENST00000516692 156 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU6-352P-201ENST00000516908 107 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 RNU6-685P-201ENST00000517088 95 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 HSBP1P1-201ENST00000555205 166 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AL121576.1-201ENST00000556055 276 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 MIR4293-201ENST00000584305 78 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC008521.1-201ENST00000587471 187 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC078899.3-201ENST00000599065 212 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AC009570.1-201ENST00000609599 745 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 AL355810.1-201ENST00000614629 552 ntBASIC4.08□□□□□ -1.76
CD248Q9HCU0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC4.08□□□□□ -1.76
CD248Q9HCU0 U2.22-201ENST00000636441 106 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 194.8 ms