Protein–RNA interactions for Protein: Q9H4L4

SENP3, Sentrin-specific protease 3, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3Q9H4L4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 Y_RNA.140-201ENST00000363474 103 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 SDHDP6-201ENST00000414693 480 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 AL035660.1-201ENST00000422041 222 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 HMGN2P31-201ENST00000432430 273 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 RN7SL466P-201ENST00000497546 295 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 AC098976.1-201ENST00000513014 541 ntBASIC8.83□□□□□ -1
SENP3Q9H4L4 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
SENP3Q9H4L4 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 ZC3H6-202ENST00000409871 11542 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
SENP3Q9H4L4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SENP3Q9H4L4 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
SENP3Q9H4L4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
SENP3Q9H4L4 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 SRSF1P1-201ENST00000424058 520 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 RNA5SP230-201ENST00000517039 122 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 FXNP1-201ENST00000555153 337 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC8.82□□□□□ -1
SENP3Q9H4L4 MIR4776-2-201ENST00000580204 80 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 MIR4438-201ENST00000585271 93 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 AC002984.1-201ENST00000591692 448 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 AL353149.1-201ENST00000610667 244 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 MIR7159-201ENST00000620587 66 ntBASIC8.82□□□□□ -1
SENP3Q9H4L4 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.82□□□□□ -1
SENP3Q9H4L4 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.82□□□□□ -1
SENP3Q9H4L4 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC8.82□□□□□ -1
SENP3Q9H4L4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC8.82□□□□□ -1
SENP3Q9H4L4 SPATA31B1P-201ENST00000434692 4016 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC8.81□□□□□ -1
SENP3Q9H4L4 RNU6-1244P-201ENST00000363614 108 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 RNU6-975P-201ENST00000384296 105 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 MIR802-201ENST00000390235 94 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 SNX2P2-201ENST00000424553 323 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 RPS29P20-201ENST00000489592 171 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC8.81□□□□□ -1
SENP3Q9H4L4 RNU6-557P-201ENST00000516842 110 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 AC087685.1-201ENST00000587507 141 ntBASIC8.81□□□□□ -1
SENP3Q9H4L4 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.81□□□□□ -1
SENP3Q9H4L4 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC8.81□□□□□ -1
SENP3Q9H4L4 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC8.81□□□□□ -1
SENP3Q9H4L4 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
SENP3Q9H4L4 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 INTS6P1-201ENST00000504674 2530 ntBASIC8.8□□□□□ -1
SENP3Q9H4L4 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC8.8□□□□□ -1
SENP3Q9H4L4 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.8□□□□□ -1
SENP3Q9H4L4 MIR342-201ENST00000362212 99 ntBASIC8.8□□□□□ -1
SENP3Q9H4L4 AL096829.1-201ENST00000413677 457 ntBASIC8.8□□□□□ -1
SENP3Q9H4L4 RPS26P47-201ENST00000427219 348 ntBASIC8.8□□□□□ -1
SENP3Q9H4L4 RPL19P16-201ENST00000433839 588 ntBASIC8.8□□□□□ -1
SENP3Q9H4L4 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.8□□□□□ -1
SENP3Q9H4L4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC8.8□□□□□ -1
SENP3Q9H4L4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
SENP3Q9H4L4 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.8□□□□□ -1
SENP3Q9H4L4 LMO3-208ENST00000441439 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
SENP3Q9H4L4 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 U3.3-201ENST00000362986 216 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC8.79□□□□□ -1
SENP3Q9H4L4 AL445646.1-201ENST00000431784 216 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 RPS17P2-201ENST00000461663 408 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 RN7SL269P-201ENST00000467795 305 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 AC090958.1-201ENST00000511122 351 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 RNU4ATAC-201ENST00000580972 127 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 MIR664A-201ENST00000626086 82 ntBASIC8.79□□□□□ -1
SENP3Q9H4L4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC8.79□□□□□ -1
SENP3Q9H4L4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.79□□□□□ -1
SENP3Q9H4L4 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC8.79□□□□□ -1
SENP3Q9H4L4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 251.6 ms