Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
MS4A3Q96HJ5 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 C4BPAP1-201ENST00000415474 1893 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 Y_RNA.545-201ENST00000384652 105 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 SNORA1.3-201ENST00000384676 136 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 EIF4A1P3-201ENST00000411521 244 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 HMGA1P8-201ENST00000414130 321 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RPL7AP49-201ENST00000429522 581 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AL591438.1-201ENST00000433508 581 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC092967.1-201ENST00000449016 481 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RPS23P2-201ENST00000463671 415 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RN7SL807P-201ENST00000470923 297 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RNA5SP441-201ENST00000516809 88 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 IGHV1-14-201ENST00000523391 241 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC107918.3-201ENST00000533272 382 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC233702.7-202ENST00000582941 211 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 RPL17P51-201ENST00000605218 238 ntBASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.5□□□□□ -1.53
MS4A3Q96HJ5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC079753.1-201ENST00000623243 3868 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RNA5SP350-201ENST00000363298 111 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RNA5SP232-201ENST00000364144 119 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RN7SKP280-201ENST00000364196 304 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RNA5SP478-201ENST00000364657 115 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 Y_RNA.360-201ENST00000365512 102 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 VPS25P1-201ENST00000455691 508 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC010285.1-201ENST00000470580 392 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 RN7SL591P-201ENST00000496150 292 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC113367.2-201ENST00000505749 160 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 ZNF519P4-201ENST00000514008 125 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC011602.1-201ENST00000546484 331 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 CYCSP38-201ENST00000559840 322 ntBASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.49□□□□□ -1.53
MS4A3Q96HJ5 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 SNORD45B-201ENST00000364617 72 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 SNORA51.4-201ENST00000364993 124 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 RNY1P4-201ENST00000384595 115 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 MIR188-201ENST00000385034 86 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 OR2AH1P-201ENST00000425717 928 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 AC094019.1-201ENST00000434678 472 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 GAPDHP59-201ENST00000435908 267 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 POU5F1P5-201ENST00000445059 658 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 RNU1-88P-201ENST00000459274 128 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 snoU13.14-201ENST00000459372 104 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 RPL21P129-201ENST00000491732 478 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 AC108145.1-201ENST00000503770 153 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 RNU7-6P-201ENST00000516845 62 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 RN7SL230P-201ENST00000580835 303 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 AL139124.1-201ENST00000609123 421 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 MIR7159-201ENST00000620587 66 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 AC007546.2-201ENST00000623996 360 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 AC000095.2-202ENST00000637415 154 ntBASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
MS4A3Q96HJ5 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms