Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC107953.1-201ENST00000522216 297 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 MIR4474-201ENST00000579189 78 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.08□□□□□ -1.76
CNGA1P29973 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.08□□□□□ -1.76
CNGA1P29973 ATP1B3P1-201ENST00000605365 821 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 CTHRC1P1-201ENST00000605383 469 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 Z82243.1-201ENST00000609432 473 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AC009248.2-201ENST00000619826 254 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 U4.6-201ENST00000621618 127 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 AL031601.2-202ENST00000622650 282 ntBASIC4.08□□□□□ -1.76
CNGA1P29973 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.08□□□□□ -1.76
CNGA1P29973 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
CNGA1P29973 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNGA1P29973 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CNGA1P29973 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNGA1P29973 RNU6-884P-201ENST00000363889 107 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 SNORD14B-201ENST00000364533 90 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RNU1-73P-201ENST00000383971 164 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RNU6-767P-201ENST00000384132 107 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 SNORA48.5-201ENST00000391143 135 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RNU6-1077P-201ENST00000410506 102 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 Y_RNA.623-201ENST00000411128 95 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.07□□□□□ -1.76
CNGA1P29973 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.07□□□□□ -1.76
CNGA1P29973 SETP5-201ENST00000437270 562 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.07□□□□□ -1.76
CNGA1P29973 AL078601.1-201ENST00000444542 271 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 MTATP6P7-201ENST00000453315 681 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RBMY2UP-201ENST00000453474 324 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC010099.1-201ENST00000455434 375 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AL583843.1-201ENST00000456070 346 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC092798.1-201ENST00000458542 409 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RNU7-170P-201ENST00000459303 61 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RPL23AP62-201ENST00000463396 453 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC079140.5-201ENST00000507882 310 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 RN7SKP209-201ENST00000516888 304 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 SNORA25.17-201ENST00000517184 124 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 BTF3P12-201ENST00000519620 469 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.07□□□□□ -1.76
CNGA1P29973 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.07□□□□□ -1.76
CNGA1P29973 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.07□□□□□ -1.76
CNGA1P29973 AL391261.3-201ENST00000557194 520 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.07□□□□□ -1.76
CNGA1P29973 AC103710.3-201ENST00000608157 948 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNGA1P29973 AC006111.3-201ENST00000622137 383 ntBASIC4.07□□□□□ -1.76
CNGA1P29973 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.07□□□□□ -1.76
CNGA1P29973 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.07□□□□□ -1.76
CNGA1P29973 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CNGA1P29973 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CNGA1P29973 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
CNGA1P29973 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CNGA1P29973 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.06□□□□□ -1.76
CNGA1P29973 CBX3P1-201ENST00000325243 554 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 RNU6-266P-201ENST00000364225 107 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 RNU6-384P-201ENST00000364900 104 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 RNU5E-4P-201ENST00000364931 120 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 RPL7P12-201ENST00000446719 750 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC087884.1-201ENST00000469738 328 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.06□□□□□ -1.76
CNGA1P29973 MIR892C-201ENST00000516410 77 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC4.06□□□□□ -1.76
CNGA1P29973 CYCSP27-201ENST00000527643 293 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AP000867.2-201ENST00000532468 320 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC087241.2-201ENST00000535801 324 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 UBE2V2P2-201ENST00000587677 504 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC093913.1-201ENST00000614178 329 ntBASIC4.06□□□□□ -1.76
CNGA1P29973 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.06□□□□□ -1.76
CNGA1P29973 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.06□□□□□ -1.76
CNGA1P29973 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.06□□□□□ -1.76
CNGA1P29973 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNGA1P29973 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNGA1P29973 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CNGA1P29973 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.06□□□□□ -1.76
CNGA1P29973 SRP72P2-201ENST00000344851 1979 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNGA1P29973 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.05□□□□□ -1.76
CNGA1P29973 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CNGA1P29973 RNU6-845P-201ENST00000362578 103 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC4.05□□□□□ -1.76
CNGA1P29973 Y_RNA.414-201ENST00000384011 101 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 SNORA32.2-201ENST00000384049 122 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CNGA1P29973 U3.26-201ENST00000391236 204 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.05□□□□□ -1.76
CNGA1P29973 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.05□□□□□ -1.76
CNGA1P29973 AC007560.1-201ENST00000426912 237 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AL627311.1-201ENST00000431514 115 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 NDUFA5P4-201ENST00000436704 385 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 USP9YP8-201ENST00000441913 500 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 RPL37P4-201ENST00000448908 268 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 snoU13.28-201ENST00000459235 104 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AC026801.1-201ENST00000497178 464 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 AC046134.1-201ENST00000514454 666 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 SNORA31.1-201ENST00000515993 133 ntBASIC4.05□□□□□ -1.76
CNGA1P29973 SNORA19.2-201ENST00000516013 114 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms