Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
PTPRFP10586 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.12□□□□□ -2.23
PTPRFP10586 SNRPEP3-201ENST00000338402 276 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 MIR95-201ENST00000385072 81 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 RNU1-139P-201ENST00000391307 165 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 RNU2-41P-201ENST00000410991 178 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPRFP10586 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPRFP10586 OR51A5P-201ENST00000415429 942 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 CYCSP48-201ENST00000417124 323 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AC244453.4-201ENST00000419150 388 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 Z80107.1-201ENST00000436830 412 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.12□□□□□ -2.23
PTPRFP10586 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPRFP10586 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.12□□□□□ -2.23
PTPRFP10586 RN7SKP179-201ENST00000516126 217 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 RNA5SP135-201ENST00000517019 125 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AC125611.1-201ENST00000549563 229 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 MIR3973-201ENST00000579824 107 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.12□□□□□ -2.23
PTPRFP10586 PRR13P7-201ENST00000605538 430 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 AL021997.1-201ENST00000605757 193 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 U4atac.1-201ENST00000618345 95 ntBASIC1.12□□□□□ -2.23
PTPRFP10586 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.12□□□□□ -2.23
PTPRFP10586 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.12□□□□□ -2.23
PTPRFP10586 RNU6-19P-201ENST00000384718 107 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 SNORA40.19-201ENST00000390846 128 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 RPL23AP6-201ENST00000446637 472 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.11□□□□□ -2.23
PTPRFP10586 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPRFP10586 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPRFP10586 RNU6-528P-201ENST00000516926 100 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPRFP10586 MIR4285-201ENST00000581001 85 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.11□□□□□ -2.23
PTPRFP10586 AC068276.1-201ENST00000605793 379 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AP002791.1-201ENST00000623291 381 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AL590396.4-201ENST00000636779 956 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.11□□□□□ -2.23
PTPRFP10586 RNU4-41P-201ENST00000364426 143 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 RNU6-932P-201ENST00000391108 106 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 NDUFS5P1-201ENST00000405668 289 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AL133264.1-201ENST00000407157 562 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 VN1R42P-201ENST00000424651 344 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 RPL7P34-201ENST00000433316 712 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC092393.1-201ENST00000439625 742 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 KATNBL1P6-201ENST00000453433 915 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.11□□□□□ -2.23
PTPRFP10586 AP1S2P1-201ENST00000457344 379 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.11□□□□□ -2.23
PTPRFP10586 CBX3P8-201ENST00000532412 525 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 CBX3P7-201ENST00000532876 502 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.11□□□□□ -2.23
PTPRFP10586 AC090502.2-201ENST00000549267 280 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC090079.2-201ENST00000575289 768 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 MIR3126-201ENST00000577443 74 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC008121.1-201ENST00000603244 268 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC024257.5-201ENST00000612739 531 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 AC092140.2-201ENST00000618027 521 ntBASIC1.11□□□□□ -2.23
PTPRFP10586 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
PTPRFP10586 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
PTPRFP10586 SNORD56.4-201ENST00000363883 71 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 RNU6-650P-201ENST00000365658 111 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 RNU6-657P-201ENST00000383904 107 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 NDUFB4P7-201ENST00000423198 363 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AC007742.1-201ENST00000425789 329 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 ELOCP26-201ENST00000436067 329 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 RPL39P6-201ENST00000448289 150 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.1□□□□□ -2.23
PTPRFP10586 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.1□□□□□ -2.23
PTPRFP10586 TPT1P8-201ENST00000510120 555 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 SNORA31.6-201ENST00000516241 130 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 RNU6-885P-201ENST00000516607 104 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.1□□□□□ -2.23
PTPRFP10586 NACAP3-201ENST00000552100 481 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 SUB1P4-201ENST00000566062 339 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.1□□□□□ -2.23
PTPRFP10586 AC133794.1-201ENST00000602731 914 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AL391813.1-201ENST00000603098 260 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AL450336.1-201ENST00000605180 586 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 MIR6857-201ENST00000613267 93 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 AC006213.5-201ENST00000619673 288 ntBASIC1.1□□□□□ -2.23
PTPRFP10586 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
PTPRFP10586 RNU1-78P-201ENST00000391248 165 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 NDUFS5P4-201ENST00000412983 318 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.09□□□□□ -2.23
PTPRFP10586 AL590383.1-201ENST00000428602 75 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 TRIM60P13-201ENST00000432350 1283 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC015922.2-201ENST00000435593 184 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.09□□□□□ -2.23
PTPRFP10586 MTCO1P53-201ENST00000441633 699 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.09□□□□□ -2.23
PTPRFP10586 AC117503.1-201ENST00000472241 394 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC113420.1-201ENST00000507903 571 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC118282.2-201ENST00000508739 374 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 RNA5SP291-201ENST00000517222 105 ntBASIC1.09□□□□□ -2.23
PTPRFP10586 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms