Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MTCO3P40-201ENST00000392516 676 ntBASIC2.79□□□□□ -1.96
VTNP04004 SAR1AP2-201ENST00000392696 594 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC068050.1-201ENST00000394891 380 ntBASIC2.79□□□□□ -1.96
VTNP04004 AL590004.2-201ENST00000404787 371 ntBASIC2.79□□□□□ -1.96
VTNP04004 Y_RNA.599-201ENST00000410489 109 ntBASIC2.79□□□□□ -1.96
VTNP04004 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.79□□□□□ -1.96
VTNP04004 MTATP6P18-201ENST00000417994 673 ntBASIC2.79□□□□□ -1.96
VTNP04004 C8orf59P1-201ENST00000429930 303 ntBASIC2.79□□□□□ -1.96
VTNP04004 RPS15AP9-201ENST00000439856 381 ntBASIC2.79□□□□□ -1.96
VTNP04004 DNAJC19P4-201ENST00000440115 345 ntBASIC2.79□□□□□ -1.96
VTNP04004 PSPHP1-201ENST00000450062 261 ntBASIC2.79□□□□□ -1.96
VTNP04004 NDUFAF4P4-201ENST00000454883 502 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.79□□□□□ -1.96
VTNP04004 RNU6-420P-201ENST00000458780 107 ntBASIC2.79□□□□□ -1.96
VTNP04004 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VTNP04004 CKS1BP7-201ENST00000522230 235 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.79□□□□□ -1.96
VTNP04004 OR5AL2P-201ENST00000532185 920 ntBASIC2.79□□□□□ -1.96
VTNP04004 DNAJC8P1-201ENST00000554535 372 ntBASIC2.79□□□□□ -1.96
VTNP04004 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.79□□□□□ -1.96
VTNP04004 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.79□□□□□ -1.96
VTNP04004 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.79□□□□□ -1.96
VTNP04004 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.79□□□□□ -1.96
VTNP04004 AL391646.1-201ENST00000603860 190 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC104763.2-201ENST00000604179 382 ntBASIC2.79□□□□□ -1.96
VTNP04004 U4.3-201ENST00000621047 82 ntBASIC2.79□□□□□ -1.96
VTNP04004 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.79□□□□□ -1.96
VTNP04004 U6.114-201ENST00000636407 96 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC068137.3-201ENST00000639191 341 ntBASIC2.79□□□□□ -1.96
VTNP04004 AC073869.6-201ENST00000640656 341 ntBASIC2.79□□□□□ -1.96
VTNP04004 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VTNP04004 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.79□□□□□ -1.96
VTNP04004 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
VTNP04004 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VTNP04004 AC007785.2-201ENST00000598627 1916 ntBASIC2.78□□□□□ -1.96
VTNP04004 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.78□□□□□ -1.96
VTNP04004 RNU6-179P-201ENST00000363350 107 ntBASIC2.78□□□□□ -1.96
VTNP04004 Y_RNA.159-201ENST00000363674 87 ntBASIC2.78□□□□□ -1.96
VTNP04004 SNORA62.1-201ENST00000364287 154 ntBASIC2.78□□□□□ -1.96
VTNP04004 RNU6-512P-201ENST00000364438 103 ntBASIC2.78□□□□□ -1.96
VTNP04004 Y_RNA.367-201ENST00000365544 101 ntBASIC2.78□□□□□ -1.96
VTNP04004 Y_RNA.505-201ENST00000384489 102 ntBASIC2.78□□□□□ -1.96
VTNP04004 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VTNP04004 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VTNP04004 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.78□□□□□ -1.96
VTNP04004 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VTNP04004 HMGB3P12-201ENST00000438745 556 ntBASIC2.78□□□□□ -1.96
VTNP04004 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.78□□□□□ -1.96
VTNP04004 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.78□□□□□ -1.96
VTNP04004 AC022364.2-201ENST00000457963 554 ntBASIC2.78□□□□□ -1.96
VTNP04004 RPL7P5-201ENST00000471472 736 ntBASIC2.78□□□□□ -1.96
VTNP04004 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 AC009646.1-201ENST00000510455 318 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC108078.2-201ENST00000510750 236 ntBASIC2.78□□□□□ -1.96
VTNP04004 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 Y_RNA.689-201ENST00000516589 107 ntBASIC2.78□□□□□ -1.96
VTNP04004 RNU6-1282P-201ENST00000516735 96 ntBASIC2.78□□□□□ -1.96
VTNP04004 RNU6-928P-201ENST00000516876 104 ntBASIC2.78□□□□□ -1.96
VTNP04004 RNA5SP291-201ENST00000517222 105 ntBASIC2.78□□□□□ -1.96
VTNP04004 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 AP003122.3-201ENST00000526316 255 ntBASIC2.78□□□□□ -1.96
VTNP04004 OR5B19P-201ENST00000531766 928 ntBASIC2.78□□□□□ -1.96
VTNP04004 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.78□□□□□ -1.96
VTNP04004 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.78□□□□□ -1.96
VTNP04004 AMZ2P1-203ENST00000565833 850 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.78□□□□□ -1.96
VTNP04004 MIR3945-201ENST00000581853 98 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC116312.1-201ENST00000606841 314 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC130324.3-201ENST00000614165 542 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC139792.3-201ENST00000623525 224 ntBASIC2.78□□□□□ -1.96
VTNP04004 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.78□□□□□ -1.96
VTNP04004 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
VTNP04004 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
VTNP04004 UBE2L2-201ENST00000254302 429 ntBASIC2.77□□□□□ -1.97
VTNP04004 Y_RNA.6-201ENST00000362350 114 ntBASIC2.77□□□□□ -1.97
VTNP04004 RNU6-799P-201ENST00000363567 107 ntBASIC2.77□□□□□ -1.97
VTNP04004 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
VTNP04004 CD24P4-201ENST00000382840 243 ntBASIC2.77□□□□□ -1.97
VTNP04004 RNU6-74P-201ENST00000384235 107 ntBASIC2.77□□□□□ -1.97
VTNP04004 SNORA24.1-201ENST00000384401 135 ntBASIC2.77□□□□□ -1.97
VTNP04004 CALM2P3-201ENST00000400429 449 ntBASIC2.77□□□□□ -1.97
VTNP04004 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VTNP04004 AL591416.1-201ENST00000404015 867 ntBASIC2.77□□□□□ -1.97
VTNP04004 AL590002.1-201ENST00000406554 418 ntBASIC2.77□□□□□ -1.97
VTNP04004 RNA5SP344-201ENST00000411081 104 ntBASIC2.77□□□□□ -1.97
VTNP04004 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
VTNP04004 AC092809.3-201ENST00000415453 231 ntBASIC2.77□□□□□ -1.97
VTNP04004 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.77□□□□□ -1.97
VTNP04004 MTCO2P19-201ENST00000427513 598 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.77□□□□□ -1.97
VTNP04004 AL512844.2-201ENST00000433990 593 ntBASIC2.77□□□□□ -1.97
VTNP04004 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.77□□□□□ -1.97
VTNP04004 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.77□□□□□ -1.97
VTNP04004 RNU6-953P-201ENST00000459154 107 ntBASIC2.77□□□□□ -1.97
VTNP04004 TRBV12-1-201ENST00000479785 344 ntBASIC2.77□□□□□ -1.97
VTNP04004 RNU6-927P-201ENST00000516199 100 ntBASIC2.77□□□□□ -1.97
VTNP04004 RNA5SP471-201ENST00000516971 106 ntBASIC2.77□□□□□ -1.97
VTNP04004 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms