Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 CDR1-202ENST00000625883 1485 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 DEFB108F-201ENST00000344638 222 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RNU5D-1-201ENST00000363299 116 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MT-TC-201ENST00000387405 66 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RNU6-1176P-201ENST00000390955 107 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 SNORD23.1-201ENST00000408212 104 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RNU4-78P-201ENST00000410940 126 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL030996.1-201ENST00000411430 235 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AIMP1P2-201ENST00000425294 312 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC007560.1-201ENST00000426912 237 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 SDCBPP1-201ENST00000440192 890 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MEMO1P3-201ENST00000459811 302 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 RPL31P60-201ENST00000478450 367 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 HMGB1P36-201ENST00000487709 576 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC108729.1-201ENST00000487812 947 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 HMGB3P3-201ENST00000510526 400 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 DEFB108D-201ENST00000527787 222 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC118942.1-201ENST00000529674 1035 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MTND4P33-201ENST00000556706 766 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC009712.1-201ENST00000564938 316 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 MIR4295-201ENST00000585286 85 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AP001330.4-201ENST00000604350 154 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AC112191.3-201ENST00000604371 277 ntBASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.12□□□□□ -2.23
COL6A6A6NMZ7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 RNU6-289P-201ENST00000364093 107 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 Z85995.1-201ENST00000415547 335 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 CCDC58P2-201ENST00000417131 366 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC244035.1-201ENST00000430042 390 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC090774.1-201ENST00000435925 246 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL354941.1-201ENST00000438600 464 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 MTCO1P53-201ENST00000441633 699 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC104563.1-201ENST00000476147 376 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC021382.1-201ENST00000483523 359 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 NCOR1P1-202ENST00000486162 291 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 HMGB1P28-201ENST00000507778 552 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 SNORD19.2-201ENST00000516978 73 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 SETP7-201ENST00000552169 453 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC012669.1-201ENST00000603209 283 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC112220.3-201ENST00000605502 502 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AL161734.1-201ENST00000609720 557 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 AC009268.2-201ENST00000621925 457 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 OR4G3P-201ENST00000633500 913 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 MIR4275-201ENST00000636486 87 ntBASIC1.11□□□□□ -2.23
COL6A6A6NMZ7 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU1-105P-201ENST00000363470 161 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNU6-298P-201ENST00000390888 96 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL359704.1-201ENST00000411586 781 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 MTCO2P5-201ENST00000422621 426 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 SNRPEP7-201ENST00000438350 220 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC004854.1-201ENST00000440356 349 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 OR6K5P-201ENST00000447050 945 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 PAXBP1P1-201ENST00000449315 447 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 snoU13.28-201ENST00000459235 104 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 RNA5SP436-201ENST00000516020 115 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC010928.2-201ENST00000588017 287 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 BNIP3P40-201ENST00000596017 556 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC021171.1-201ENST00000603137 706 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL158211.4-201ENST00000606988 584 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AP002826.1-201ENST00000608835 315 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 PART1_2.1-201ENST00000612397 250 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC068831.7-201ENST00000616954 363 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC099654.9-201ENST00000637055 678 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AC009902.3-201ENST00000606235 2172 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 AL138713.1-201ENST00000624026 2130 ntBASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.1□□□□□ -2.23
COL6A6A6NMZ7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms