Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 AC010999.1-201ENST00000611856 324 ntBASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 AL365222.1-201ENST00000614661 98 ntBASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 AC091953.3-201ENST00000623220 236 ntBASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 AC118273.1-201ENST00000525324 3006 ntBASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 SAMMSON-226ENST00000642089 1582 ntBASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.73□□□□□ -1.65
HRH3Q9Y5N1 AL109809.4-201ENST00000603520 2185 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC126323.6-202ENST00000568092 3511 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 SNURFL-201ENST00000309296 343 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RNU6-653P-201ENST00000363074 106 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 SNORD115-8-201ENST00000363856 82 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 Y_RNA.238-201ENST00000364441 102 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 SNORD115-38-201ENST00000365037 82 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 SNORD116-20-201ENST00000384529 92 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AL078599.1-201ENST00000402075 293 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RPL23AP95-201ENST00000426806 265 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 H2AFZP5-201ENST00000446960 382 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 snoU13.24-201ENST00000458998 104 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC090281.1-201ENST00000523019 276 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC019159.1-201ENST00000605094 187 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 AC023043.4-201ENST00000612081 449 ntBASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
HRH3Q9Y5N1 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
HRH3Q9Y5N1 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HRH3Q9Y5N1 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
HRH3Q9Y5N1 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.71□□□□□ -1.65
HRH3Q9Y5N1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
HRH3Q9Y5N1 SNORD32A-201ENST00000364805 84 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RNU1-140P-201ENST00000365040 165 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RN7SKP16-201ENST00000410180 299 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 snoU13.20-201ENST00000459180 104 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RPS27AP9-201ENST00000477681 438 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RNA5SP464-201ENST00000516251 108 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RNU6-191P-201ENST00000516295 94 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 SNORA31.8-201ENST00000516327 108 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RNU6-703P-201ENST00000516946 107 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 HSPE1P4-201ENST00000550617 308 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC233702.2-202ENST00000562547 291 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC055872.1-201ENST00000570978 278 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC048347.1-201ENST00000624621 427 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AL672167.1-204ENST00000641875 3017 ntBASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.71□□□□□ -1.66
HRH3Q9Y5N1 AC110491.1-201ENST00000562191 2010 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 SNORD56.1-201ENST00000362913 68 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 RNU4-80P-201ENST00000363200 141 ntBASIC4.7□□□□□ -1.66
HRH3Q9Y5N1 Y_RNA.121-201ENST00000363309 113 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms