Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC124947.2-202ENST00000552735 133 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC087465.1-201ENST00000560574 245 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 MIR4698-201ENST00000577795 80 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AP003973.1-201ENST00000604639 691 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 MTND4LP5-201ENST00000605152 292 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AL161423.1-201ENST00000613700 262 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC073592.7-201ENST00000623659 507 ntBASIC1.58□□□□□ -2.16
TOPBP1Q92547 AC007785.2-201ENST00000598627 1916 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
TOPBP1Q92547 RNU6-1066P-201ENST00000363573 105 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 SNORA3A-201ENST00000364113 130 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 RNU6-997P-201ENST00000384725 107 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 RNU6-220P-201ENST00000390919 107 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 HMGB1P17-201ENST00000403495 628 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 HMGB1P49-201ENST00000418882 569 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AL096803.2-201ENST00000450032 677 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 XACT-201ENST00000468762 497 ntTSL 5 BASIC1.57□□□□□ -2.16
TOPBP1Q92547 LARP1BP2-201ENST00000486594 519 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AC114786.4-201ENST00000508771 728 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 MRPS17P9-201ENST00000511924 393 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.57□□□□□ -2.16
TOPBP1Q92547 AC114797.1-201ENST00000514003 728 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 SCARNA11.3-201ENST00000517276 130 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.57□□□□□ -2.16
TOPBP1Q92547 BNIP3P24-201ENST00000593398 557 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AL096840.1-201ENST00000603287 93 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AL161729.4-201ENST00000604650 476 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 AC004009.2-201ENST00000623016 728 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 U6.101-201ENST00000637707 76 ntBASIC1.57□□□□□ -2.16
TOPBP1Q92547 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.57□□□□□ -2.16
TOPBP1Q92547 Y_RNA.85-201ENST00000363014 111 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 RNU6-217P-201ENST00000384164 104 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 MIR514A1-201ENST00000385133 98 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 MTCO3P1-205ENST00000422088 832 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL360221.1-201ENST00000445989 335 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 VN1R10P-201ENST00000447106 875 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL049874.1-201ENST00000489560 388 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC092451.2-201ENST00000538746 658 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL391261.3-201ENST00000557194 520 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 FAM71BP1-201ENST00000604431 523 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC080013.4-201ENST00000607624 649 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC090970.3-201ENST00000612566 866 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL592310.1-201ENST00000414330 671 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC004941.2-201ENST00000427009 228 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 RNU7-140P-201ENST00000459546 60 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC105313.1-201ENST00000509121 353 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC022447.1-201ENST00000515358 464 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 RNU5F-8P-201ENST00000515941 111 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 SCARNA15.2-201ENST00000516409 127 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 SNORA48.10-201ENST00000516965 160 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 AL512605.2-201ENST00000592972 256 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.56□□□□□ -2.16
TOPBP1Q92547 OR4H6P-202ENST00000603819 340 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC135507.1-201ENST00000607214 561 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 AC004067.1-201ENST00000608733 700 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 SDR42E1P2-201ENST00000614861 481 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 MIR6130-201ENST00000619419 109 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 SDR42E1P4-201ENST00000620894 481 ntBASIC1.56□□□□□ -2.16
TOPBP1Q92547 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC010329.5-201ENST00000623497 2174 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC018630.2-201ENST00000534866 2403 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
TOPBP1Q92547 RNU6-481P-201ENST00000384194 107 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC007742.1-201ENST00000425789 329 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 ELOCP26-201ENST00000436067 329 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC105252.1-201ENST00000503089 286 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 COL6A4P2-205ENST00000509855 506 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AP005902.1-201ENST00000521358 186 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 HSBP1P1-201ENST00000555205 166 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC022662.1-201ENST00000580252 331 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AP001429.1-201ENST00000602568 530 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC040174.2-201ENST00000602701 465 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AP000403.1-201ENST00000603349 851 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 KATNBL1P5-201ENST00000605015 517 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AL450336.1-201ENST00000605180 586 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 FTX_3.1-201ENST00000610451 147 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AC008498.1-201ENST00000613012 531 ntBASIC1.55□□□□□ -2.16
TOPBP1Q92547 AP001486.3-201ENST00000615334 372 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms