Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RN7SL690P-201ENST00000582087 240 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 AC091905.2-201ENST00000623143 306 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 OR14L1P-202ENST00000641545 3009 ntBASIC4.13□□□□□ -1.75
ATG4DQ86TL0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ATG4DQ86TL0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 NCAPGP1-201ENST00000505112 1814 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 CPHL1P-201ENST00000461341 3407 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.123-201ENST00000363338 102 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RNU6-449P-201ENST00000383914 107 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.435-201ENST00000384095 112 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 SNORA70F-201ENST00000384142 135 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RNU6-514P-201ENST00000384208 107 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RNA5SP397-201ENST00000391323 118 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RNU6-257P-201ENST00000410238 98 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RPEP3-201ENST00000425462 676 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 Z82188.1-201ENST00000436709 154 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AC008267.6-201ENST00000441664 139 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RPS29P27-201ENST00000463711 170 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RPL23AP45-201ENST00000476406 468 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 SRI-210ENST00000490437 570 ntTSL 2 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AC091959.1-201ENST00000495857 238 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AK3P2-201ENST00000507976 429 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RNU6-919P-201ENST00000516731 104 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 RPL21P9-201ENST00000556149 474 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 BPIFA4P-203ENST00000603168 689 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 AL592182.3-201ENST00000642132 3304 ntBASIC4.12□□□□□ -1.75
ATG4DQ86TL0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ATG4DQ86TL0 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC007390.2-201ENST00000606229 3803 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC092435.4-201ENST00000623012 4159 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 RNU1-63P-201ENST00000383902 164 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 U3.22-201ENST00000391120 215 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.597-201ENST00000410463 100 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AL117339.3-201ENST00000418733 162 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC068287.1-201ENST00000430283 295 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 HSPD1P21-201ENST00000436541 245 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 RNU7-110P-201ENST00000516891 62 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ATP5F1P5-201ENST00000526403 760 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 SRGNP1-201ENST00000603392 451 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.11□□□□□ -1.75
ATG4DQ86TL0 ZNF826P-207ENST00000622273 1910 ntBASIC4.11□□□□□ -1.75
ATG4DQ86TL0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AP001273.1-201ENST00000624493 3152 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4DQ86TL0 UBE2L2-201ENST00000254302 429 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.215-201ENST00000364204 112 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RNU6-512P-201ENST00000364438 103 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 Y_RNA.273-201ENST00000364703 102 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RNU6-21P-201ENST00000384710 107 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RN7SKP167-201ENST00000411047 285 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 AL592148.1-201ENST00000413568 445 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 CR769767.1-201ENST00000436337 346 ntBASIC4.1□□□□□ -1.75
ATG4DQ86TL0 RPL23AP93-201ENST00000440847 484 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms