Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC091903.1-201ENST00000624322 454 ntBASIC4.47□□□□□ -1.69
PCDH1Q08174 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
PCDH1Q08174 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
PCDH1Q08174 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.47□□□□□ -1.69
PCDH1Q08174 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PCDH1Q08174 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.47□□□□□ -1.69
PCDH1Q08174 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
PCDH1Q08174 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
PCDH1Q08174 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PCDH1Q08174 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDH1Q08174 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PCDH1Q08174 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH1Q08174 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH1Q08174 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 Y_RNA.83-201ENST00000363005 113 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 SNORD113-8-201ENST00000363497 74 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 SNORA19-201ENST00000384737 128 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 Y_RNA.793-201ENST00000411222 111 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH1Q08174 AL358453.1-201ENST00000422522 250 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 Z82188.1-201ENST00000436709 154 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH1Q08174 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.46□□□□□ -1.7
PCDH1Q08174 AC083982.1-201ENST00000485679 344 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC108022.1-201ENST00000493466 478 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDH1Q08174 TRAV28-201ENST00000557548 323 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 ATP5J2P6-201ENST00000565203 266 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC023824.2-201ENST00000566185 400 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC120057.2-201ENST00000571520 271 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC091042.1-201ENST00000579213 173 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 U2.14-201ENST00000615943 113 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 MIR6853-201ENST00000619642 74 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC099506.2-201ENST00000623074 221 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 SCARNA4-202ENST00000625402 129 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.46□□□□□ -1.7
PCDH1Q08174 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 AC139713.2-214ENST00000642059 1811 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 AC233981.2-201ENST00000611524 1614 ntBASIC4.46□□□□□ -1.7
PCDH1Q08174 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PCDH1Q08174 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDH1Q08174 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDH1Q08174 A2MP1-204ENST00000566278 4130 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 AC007785.2-201ENST00000598627 1916 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNU6-774P-201ENST00000363238 107 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNA5SP28-201ENST00000363841 119 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNU6-746P-201ENST00000384112 109 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNU6-1181P-201ENST00000384191 106 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNU6-937P-201ENST00000384325 106 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 MIR195-201ENST00000385194 87 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDH1Q08174 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDH1Q08174 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PCDH1Q08174 Z98745.1-201ENST00000402553 494 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDH1Q08174 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
PCDH1Q08174 AC124916.1-201ENST00000444020 547 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 snoU13.4-201ENST00000458916 104 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 Y_RNA.644-201ENST00000459006 113 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 SNORD108-201ENST00000459332 71 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.45□□□□□ -1.7
PCDH1Q08174 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.45□□□□□ -1.7
PCDH1Q08174 OR7H2P-201ENST00000513483 306 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RNU6-496P-201ENST00000516145 99 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 Y_RNA.674-201ENST00000516362 113 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 SNORA70.16-201ENST00000516390 95 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 MIR4659A-201ENST00000580269 81 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 RN7SL690P-201ENST00000582087 240 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 MIR4480-201ENST00000582492 71 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 FAM25E-202ENST00000608562 189 ntBASIC4.45□□□□□ -1.7
PCDH1Q08174 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDH1Q08174 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDH1Q08174 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH1Q08174 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH1Q08174 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH1Q08174 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH1Q08174 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDH1Q08174 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH1Q08174 ZNF137P-201ENST00000456718 1920 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 AC009541.1-201ENST00000438279 2662 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH1Q08174 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.44□□□□□ -1.7
PCDH1Q08174 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH1Q08174 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
PCDH1Q08174 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
PCDH1Q08174 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH1Q08174 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDH1Q08174 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDH1Q08174 RNU6-1301P-201ENST00000362724 104 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 RNU1-20P-201ENST00000363314 162 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 RNU6-105P-201ENST00000363909 104 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 RNA5SP151-201ENST00000365632 117 ntBASIC4.44□□□□□ -1.7
PCDH1Q08174 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms