Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA3O60609 SNORA73.1-201ENST00000363107 205 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 RNU6-1205P-201ENST00000363625 106 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 RNU6-324P-201ENST00000363957 106 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 AL590004.2-201ENST00000404787 371 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 RNF10P1-201ENST00000418589 369 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 AL358075.3-201ENST00000426289 226 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 AC091390.3-201ENST00000426478 338 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 AL627311.1-201ENST00000431514 115 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.05□□□□□ -1.6
GFRA3O60609 AC091874.1-201ENST00000511402 339 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 RNU6-143P-201ENST00000516942 93 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 MIR4724-201ENST00000579485 89 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 AL138963.2-201ENST00000605137 226 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GFRA3O60609 AC112200.1-201ENST00000625015 234 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GFRA3O60609 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.05□□□□□ -1.6
GFRA3O60609 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 AC018628.1-201ENST00000624147 3819 ntBASIC5.05□□□□□ -1.6
GFRA3O60609 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GFRA3O60609 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
GFRA3O60609 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA3O60609 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
GFRA3O60609 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA3O60609 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GFRA3O60609 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA3O60609 MIR302B-201ENST00000362188 73 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 SNORA63.5-201ENST00000363548 123 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 RNU6-873P-201ENST00000363833 107 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 Y_RNA.622-201ENST00000411091 108 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 AC096649.2-201ENST00000416186 393 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 AC007560.1-201ENST00000426912 237 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 RPS12P10-201ENST00000427031 377 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 NDUFB4P6-201ENST00000436819 366 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 AL589765.3-201ENST00000446084 462 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.04□□□□□ -1.6
GFRA3O60609 RNU6-1198P-201ENST00000516904 67 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 IGLVIV-53-201ENST00000520107 367 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 MIR6853-201ENST00000619642 74 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 MIR3674-201ENST00000636576 68 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 AC241585.2-209ENST00000638217 143 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 AC006206.1-201ENST00000544842 3387 ntBASIC5.04□□□□□ -1.6
GFRA3O60609 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.04□□□□□ -1.6
GFRA3O60609 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.04□□□□□ -1.6
GFRA3O60609 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA3O60609 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA3O60609 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
GFRA3O60609 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
GFRA3O60609 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
GFRA3O60609 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
GFRA3O60609 AC022336.2-201ENST00000568966 2538 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 Y_RNA.78-201ENST00000362970 110 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 RNA5SP509-201ENST00000364577 119 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 RNU6-1240P-201ENST00000365155 104 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 GNG5P2-201ENST00000372054 207 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 MIR554-201ENST00000384874 96 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 AC092447.6-201ENST00000414578 210 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 RNU2-13P-201ENST00000515909 113 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 SNORA31.8-201ENST00000516327 108 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.03□□□□□ -1.6
GFRA3O60609 AC027369.5-201ENST00000533838 755 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 AC021231.3-201ENST00000558497 370 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 RN7SL356P-201ENST00000582228 248 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.03□□□□□ -1.6
GFRA3O60609 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.03□□□□□ -1.6
GFRA3O60609 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
GFRA3O60609 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
GFRA3O60609 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
GFRA3O60609 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
GFRA3O60609 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
GFRA3O60609 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms