Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 MIR518D-201ENST00000385014 87 ntBASIC1.99□□□□□ -2.09
RNF13O43567 RNU6-1242P-201ENST00000391052 103 ntBASIC1.99□□□□□ -2.09
RNF13O43567 SNORA46.1-201ENST00000391069 153 ntBASIC1.99□□□□□ -2.09
RNF13O43567 SNORA40C-201ENST00000391285 128 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC127391.1-201ENST00000411737 98 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 AIMP1P2-201ENST00000425294 312 ntBASIC1.99□□□□□ -2.09
RNF13O43567 UBE2FP3-201ENST00000436366 524 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RNF13O43567 BTF3P15-201ENST00000455606 336 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC112771.1-201ENST00000463581 102 ntBASIC1.99□□□□□ -2.09
RNF13O43567 MTND1P3-201ENST00000484956 952 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC107032.1-201ENST00000485945 480 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 RPL23AP49-201ENST00000492925 468 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF13O43567 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 SNORA31.19-201ENST00000517079 126 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 AC025755.1-201ENST00000521306 278 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC087276.1-201ENST00000529659 480 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.99□□□□□ -2.09
RNF13O43567 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.99□□□□□ -2.09
RNF13O43567 LRRC37A5P-203ENST00000580181 585 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.99□□□□□ -2.09
RNF13O43567 AL670379.10-201ENST00000604330 253 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AL670379.9-201ENST00000605428 253 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AL365204.3-201ENST00000612448 685 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AC009831.4-201ENST00000620744 325 ntBASIC1.99□□□□□ -2.09
RNF13O43567 SDR42E1P4-201ENST00000620894 481 ntBASIC1.99□□□□□ -2.09
RNF13O43567 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.99□□□□□ -2.09
RNF13O43567 FRG1KP-201ENST00000623592 341 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AL512643.1-201ENST00000635735 524 ntBASIC1.99□□□□□ -2.09
RNF13O43567 AL445984.1-201ENST00000637834 659 ntBASIC1.99□□□□□ -2.09
RNF13O43567 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF13O43567 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF13O43567 RNU6-898P-201ENST00000365627 104 ntBASIC1.98□□□□□ -2.09
RNF13O43567 Y_RNA.534-201ENST00000384599 112 ntBASIC1.98□□□□□ -2.09
RNF13O43567 RNU2-62P-201ENST00000410868 191 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AL160275.3-201ENST00000423876 471 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF13O43567 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.98□□□□□ -2.09
RNF13O43567 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.98□□□□□ -2.09
RNF13O43567 AC003071.1-201ENST00000451219 789 ntBASIC1.98□□□□□ -2.09
RNF13O43567 FCF1P6-201ENST00000456841 595 ntBASIC1.98□□□□□ -2.09
RNF13O43567 USP9YP25-201ENST00000457708 443 ntBASIC1.98□□□□□ -2.09
RNF13O43567 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AC109486.1-201ENST00000486833 374 ntBASIC1.98□□□□□ -2.09
RNF13O43567 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
RNF13O43567 SNORA48.11-201ENST00000517015 89 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.98□□□□□ -2.09
RNF13O43567 PSMA3P-201ENST00000555485 635 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RNF13O43567 MIR3146-201ENST00000580367 79 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AC112187.2-201ENST00000604345 283 ntBASIC1.98□□□□□ -2.09
RNF13O43567 AP000553.5-201ENST00000641933 54 ntBASIC1.98□□□□□ -2.09
RNF13O43567 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
RNF13O43567 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF13O43567 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
RNF13O43567 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RNF13O43567 MTND4P1-201ENST00000457501 1466 ntBASIC1.97□□□□□ -2.09
RNF13O43567 RNU6-931P-201ENST00000363850 107 ntBASIC1.97□□□□□ -2.09
RNF13O43567 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RNF13O43567 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF13O43567 HMGB3P2-201ENST00000411913 584 ntBASIC1.97□□□□□ -2.09
RNF13O43567 HMGB1P11-201ENST00000413899 637 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF13O43567 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF13O43567 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC1.97□□□□□ -2.09
RNF13O43567 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF13O43567 AL078601.1-201ENST00000444542 271 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.97□□□□□ -2.09
RNF13O43567 FABP5P13-201ENST00000452144 328 ntBASIC1.97□□□□□ -2.09
RNF13O43567 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.97□□□□□ -2.09
RNF13O43567 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
RNF13O43567 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC1.97□□□□□ -2.09
RNF13O43567 RPL7P43-201ENST00000478876 753 ntBASIC1.97□□□□□ -2.09
RNF13O43567 RNU6-678P-201ENST00000516832 109 ntBASIC1.97□□□□□ -2.09
RNF13O43567 RNU6-1315P-201ENST00000517187 99 ntBASIC1.97□□□□□ -2.09
RNF13O43567 MTATP6P15-201ENST00000527233 835 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AC023050.2-201ENST00000544968 387 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AL713866.2-201ENST00000603579 219 ntBASIC1.97□□□□□ -2.09
RNF13O43567 AC092953.2-201ENST00000608000 699 ntBASIC1.97□□□□□ -2.09
RNF13O43567 uc_338.12-201ENST00000616344 181 ntBASIC1.97□□□□□ -2.09
RNF13O43567 ZNF658B-202ENST00000615961 3375 ntBASIC1.97□□□□□ -2.09
RNF13O43567 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF13O43567 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
RNF13O43567 Y_RNA.46-201ENST00000362695 102 ntBASIC1.96□□□□□ -2.1
RNF13O43567 RNY3P13-201ENST00000365542 102 ntBASIC1.96□□□□□ -2.1
RNF13O43567 MIR561-201ENST00000385216 97 ntBASIC1.96□□□□□ -2.1
RNF13O43567 RNU6-1176P-201ENST00000390955 107 ntBASIC1.96□□□□□ -2.1
RNF13O43567 HMGN2P39-201ENST00000398005 273 ntBASIC1.96□□□□□ -2.1
RNF13O43567 BTF3P7-201ENST00000407097 488 ntBASIC1.96□□□□□ -2.1
RNF13O43567 RNU4-53P-201ENST00000410828 140 ntBASIC1.96□□□□□ -2.1
RNF13O43567 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.96□□□□□ -2.1
RNF13O43567 AL591212.2-201ENST00000433923 257 ntBASIC1.96□□□□□ -2.1
RNF13O43567 HMGB3P12-201ENST00000438745 556 ntBASIC1.96□□□□□ -2.1
RNF13O43567 AC140059.1-201ENST00000489238 361 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms