Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 AL022342.1-201ENST00000400363 863 ntBASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
CDC42BPBQ9Y5S2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 LINC00265-3P-201ENST00000447588 903 ntBASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 USP39-204ENST00000409766 2033 ntTSL 2 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
CDC42BPBQ9Y5S2 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
CDC42BPBQ9Y5S2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 AC112497.1-201ENST00000624824 639 ntBASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 AC106795.1-205ENST00000512851 1056 ntBASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 AC074051.2-201ENST00000565115 352 ntBASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 NAA38-203ENST00000575071 553 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
CDC42BPBQ9Y5S2 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC28.76■■■□□ 2.2
CDC42BPBQ9Y5S2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC28.76■■■□□ 2.2
CDC42BPBQ9Y5S2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 TEX21P-204ENST00000641479 1693 ntBASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 LINC00167-201ENST00000530583 1419 ntBASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 GRAMD4P1-201ENST00000435181 1110 ntBASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 AC010240.3-201ENST00000607688 395 ntBASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
CDC42BPBQ9Y5S2 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 TK1-205ENST00000590862 642 ntTSL 3 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
CDC42BPBQ9Y5S2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 AP002469.2-201ENST00000531724 424 ntBASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 AC104390.1-201ENST00000555663 520 ntBASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 AKR1C7P-201ENST00000305623 895 ntBASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC28.74■■■□□ 2.19
CDC42BPBQ9Y5S2 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms