Protein–RNA interactions for Protein: Q9Y3C4

TPRKB, EKC/KEOPS complex subunit TPRKB, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRKBQ9Y3C4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TPRKBQ9Y3C4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ESPNP-201ENST00000270691 2015 ntBASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 AC116351.2-201ENST00000606540 1585 ntBASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 MCRIP2P1-201ENST00000394346 511 ntBASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 AC139713.2-201ENST00000641328 2723 ntBASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 LINC02228-203ENST00000641970 1355 ntBASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TPRKBQ9Y3C4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 YBX1P1-201ENST00000445822 960 ntBASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AC105020.6-201ENST00000621523 1217 ntBASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TPRKBQ9Y3C4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 AL162412.1-201ENST00000567129 965 ntBASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 TERF1P2-201ENST00000583350 1212 ntBASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TPRKBQ9Y3C4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 SDHAP1-207ENST00000440850 2000 ntBASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TPRKBQ9Y3C4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms