Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
ZC3H4Q9UPT8 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 PMS2P7-201ENST00000506558 1336 ntBASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 FICD-205ENST00000552758 603 ntTSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 AC106730.1-201ENST00000566722 1090 ntBASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 MIR3917-201ENST00000580971 93 ntBASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 AC099336.1-202ENST00000602961 463 ntBASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC23.03■■□□□ 1.28
ZC3H4Q9UPT8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 PLK5-205ENST00000642079 1969 ntBASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 FP700111.2-201ENST00000619190 1892 ntBASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 TP73-AS1-207ENST00000624167 988 ntBASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 AL157888.1-201ENST00000631930 593 ntBASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
ZC3H4Q9UPT8 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 AC092720.2-201ENST00000602388 1665 ntBASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC23.01■■□□□ 1.27
ZC3H4Q9UPT8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 IGHV3-47-201ENST00000425060 335 ntBASIC23■■□□□ 1.27
ZC3H4Q9UPT8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 LITAF-220ENST00000620789 692 ntTSL 5 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 LINC00167-201ENST00000530583 1419 ntBASIC23■■□□□ 1.27
ZC3H4Q9UPT8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
ZC3H4Q9UPT8 AC036111.1-201ENST00000533973 1582 ntBASIC23■■□□□ 1.27
ZC3H4Q9UPT8 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
ZC3H4Q9UPT8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms