Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 AC128688.1-201ENST00000487626 519 ntBASIC20.37■□□□□ 0.85
SIX4Q9UIU6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 AC010653.2-201ENST00000623505 997 ntBASIC20.37■□□□□ 0.85
SIX4Q9UIU6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
SIX4Q9UIU6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.36■□□□□ 0.85
SIX4Q9UIU6 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 RCN1P1-201ENST00000400413 996 ntBASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AC113347.1-201ENST00000413321 391 ntBASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AC010203.1-204ENST00000548782 407 ntBASIC20.35■□□□□ 0.85
SIX4Q9UIU6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AC005363.2-201ENST00000618631 242 ntBASIC20.35■□□□□ 0.85
SIX4Q9UIU6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 AC073508.3-201ENST00000619697 1419 ntBASIC20.35■□□□□ 0.85
SIX4Q9UIU6 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
SIX4Q9UIU6 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.34■□□□□ 0.85
SIX4Q9UIU6 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 GPAT2P1-201ENST00000444924 1672 ntBASIC20.33■□□□□ 0.85
SIX4Q9UIU6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 TERF1P1-201ENST00000311003 1181 ntBASIC20.33■□□□□ 0.85
SIX4Q9UIU6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 AC005521.1-201ENST00000393351 872 ntBASIC20.33■□□□□ 0.85
SIX4Q9UIU6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.33■□□□□ 0.85
SIX4Q9UIU6 HMGA1P5-201ENST00000412453 271 ntBASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms