Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 HCG4P8-203ENST00000443049 980 ntBASIC19.19■□□□□ 0.66
MBD1Q9UIS9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD1Q9UIS9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC112907.2-201ENST00000448639 330 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 VENTXP5-201ENST00000523979 775 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AL136038.3-201ENST00000561909 1096 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC083849.1-201ENST00000615227 514 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC007952.6-201ENST00000573168 2673 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 AC003957.1-201ENST00000625108 2673 ntBASIC19.18■□□□□ 0.66
MBD1Q9UIS9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD1Q9UIS9 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 KRT8P11-201ENST00000409686 1436 ntBASIC19.17■□□□□ 0.66
MBD1Q9UIS9 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 AL450487.1-201ENST00000426799 995 ntBASIC19.17■□□□□ 0.66
MBD1Q9UIS9 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.17■□□□□ 0.66
MBD1Q9UIS9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 AC069148.1-201ENST00000608741 768 ntBASIC19.17■□□□□ 0.66
MBD1Q9UIS9 HYMAI.1-201ENST00000620949 238 ntBASIC19.17■□□□□ 0.66
MBD1Q9UIS9 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
MBD1Q9UIS9 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 AC026396.1-201ENST00000419388 421 ntBASIC19.16■□□□□ 0.66
MBD1Q9UIS9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 CLEC4GP1-201ENST00000596555 870 ntBASIC19.16■□□□□ 0.66
MBD1Q9UIS9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.16■□□□□ 0.66
MBD1Q9UIS9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD1Q9UIS9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MBD1Q9UIS9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD1Q9UIS9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MBD1Q9UIS9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms