Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 AC087388.1-201ENST00000571370 1112 ntBASIC17.47■□□□□ 0.39
LRFN1Q9P244 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.47■□□□□ 0.39
LRFN1Q9P244 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRFN1Q9P244 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.47■□□□□ 0.39
LRFN1Q9P244 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 RNF152P1-201ENST00000397754 604 ntBASIC17.46■□□□□ 0.39
LRFN1Q9P244 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 YBX1P2-201ENST00000489612 999 ntBASIC17.46■□□□□ 0.39
LRFN1Q9P244 AC022616.7-201ENST00000525383 220 ntBASIC17.46■□□□□ 0.39
LRFN1Q9P244 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.46■□□□□ 0.39
LRFN1Q9P244 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LRFN1Q9P244 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 AC063952.2-201ENST00000498792 1227 ntBASIC17.45■□□□□ 0.38
LRFN1Q9P244 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 AL031432.5-201ENST00000641059 760 ntBASIC17.45■□□□□ 0.38
LRFN1Q9P244 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.45■□□□□ 0.38
LRFN1Q9P244 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LRFN1Q9P244 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.44■□□□□ 0.38
LRFN1Q9P244 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 TSPY5P-201ENST00000426936 936 ntBASIC17.44■□□□□ 0.38
LRFN1Q9P244 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 AC140113.3-201ENST00000605663 199 ntBASIC17.44■□□□□ 0.38
LRFN1Q9P244 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
LRFN1Q9P244 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LRFN1Q9P244 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms