Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 NEK4P2-201ENST00000580004 1012 ntBASIC21.55■■□□□ 1.04
COL20A1Q9P218 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 AL358472.4-201ENST00000633140 710 ntBASIC21.55■■□□□ 1.04
COL20A1Q9P218 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
COL20A1Q9P218 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
COL20A1Q9P218 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COL20A1Q9P218 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.54■■□□□ 1.04
COL20A1Q9P218 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 AC036111.1-201ENST00000533973 1582 ntBASIC21.54■■□□□ 1.04
COL20A1Q9P218 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.54■■□□□ 1.04
COL20A1Q9P218 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 HOMER2P1-201ENST00000455653 964 ntBASIC21.54■■□□□ 1.04
COL20A1Q9P218 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
COL20A1Q9P218 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.54■■□□□ 1.04
COL20A1Q9P218 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
COL20A1Q9P218 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.53■■□□□ 1.04
COL20A1Q9P218 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.53■■□□□ 1.04
COL20A1Q9P218 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
COL20A1Q9P218 AC007952.6-201ENST00000573168 2673 ntBASIC21.52■■□□□ 1.04
COL20A1Q9P218 AC003957.1-201ENST00000625108 2673 ntBASIC21.52■■□□□ 1.04
COL20A1Q9P218 IRX1P1-201ENST00000438849 1838 ntBASIC21.52■■□□□ 1.04
COL20A1Q9P218 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 SPDYE15P-201ENST00000424157 909 ntBASIC21.52■■□□□ 1.04
COL20A1Q9P218 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.52■■□□□ 1.04
COL20A1Q9P218 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
COL20A1Q9P218 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
COL20A1Q9P218 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
COL20A1Q9P218 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.52■■□□□ 1.03
COL20A1Q9P218 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC21.51■■□□□ 1.03
COL20A1Q9P218 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
COL20A1Q9P218 AC093484.2-201ENST00000580996 2166 ntBASIC21.51■■□□□ 1.03
COL20A1Q9P218 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC21.51■■□□□ 1.03
COL20A1Q9P218 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 PKD1P6-201ENST00000343738 4769 ntBASIC21.51■■□□□ 1.03
COL20A1Q9P218 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.51■■□□□ 1.03
COL20A1Q9P218 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
COL20A1Q9P218 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.51■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms